Pairwise Alignments

Query, 326 a.a., Uncharacterized protein YggR from Escherichia coli ECOR38

Subject, 372 a.a., twitching motility protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  260 bits (664), Expect = 4e-74
 Identities = 140/314 (44%), Positives = 199/314 (63%), Gaps = 6/314 (1%)

Query: 16  SDLHLCSAWPARWRIRG---RMEAAPFDAPDVEELLREWLDDDQRTILLENGQLDFAVSL 72
           SDLHL S      R+ G   R++    D   +  +L E +   +R     +G LDF  ++
Sbjct: 17  SDLHLSSGCTPMVRVHGTLQRLDHPALDDATLAAMLDEIIPPARRDEFAASGDLDFGYAV 76

Query: 73  AENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPLILPELLKSENGLILVTGATGSG 132
               R R + +   +G+  A R +P + P +E LG P +L +L     GL+L+TG TGSG
Sbjct: 77  PGMARYRANFYRHERGVGAAFREIPGNIPSVEALGLPPLLRDLAMLPKGLVLLTGPTGSG 136

Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192
           KSTTLAAM+ + N H   HI+T+EDPVE+++  + CLI QRE+G H  +FA+ LR ALRE
Sbjct: 137 KSTTLAAMIDHANTHRRDHIITIEDPVEFVHEPRGCLINQREVGRHTKSFAAALRGALRE 196

Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252
           DPD+IL+GE+RD ETI LAL AAETGHLVL+T+HT  A + ++R+V+ FP++ +  +R  
Sbjct: 197 DPDIILVGEMRDLETISLALEAAETGHLVLSTVHTISAPKTIDRIVEVFPSEMQAQIRTS 256

Query: 253 LAGSLRAVLSQKL--EVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310
           L+ +L+AV+SQ L    D+  GRVA  E+++  PAV NLIRE KT+QL  V+QTG+  GM
Sbjct: 257 LSETLQAVISQVLFPRADR-PGRVAALEIMLGVPAVRNLIRESKTYQLTSVLQTGKNAGM 315

Query: 311 LTFQQSYQQRVGEG 324
            T      + +G G
Sbjct: 316 QTLDDDILRLLGAG 329