Pairwise Alignments

Query, 372 a.a., hydrogenase 2 small subunit from Escherichia coli ECOR38

Subject, 378 a.a., hydrogen:quinone oxidoreductase (RefSeq) from Shewanella amazonensis SB2B

 Score =  295 bits (756), Expect = 1e-84
 Identities = 160/359 (44%), Positives = 220/359 (61%), Gaps = 20/359 (5%)

Query: 11  HGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECTGCTESLLRAT 70
           HGI RRDFMK  A++ A + L    +  +AE+     R P+IW+   ECTGC+ESL+RA 
Sbjct: 36  HGITRRDFMKWSASVTAMLALPLPFSTLVAEAAELADRVPLIWLHMAECTGCSESLVRAD 95

Query: 71  HPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGSIPLKDNGIYC 130
            P +++L+ + ISLEYHE L AA G Q EEN  +ALE YKG Y+L V+G++P  +NG + 
Sbjct: 96  TPNLDSLIFDHISLEYHETLMAAAGWQAEENLEHALETYKGNYLLAVEGAVPTANNGAFL 155

Query: 131 MVA--GEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTVINI 188
            V   G   ++ I+ AA+GAAAI+++G+C+++GGV AA  NPTGA  + EV+  K VIN+
Sbjct: 156 TVGCKGHTGLEIIKHAADGAAAIVSVGTCASFGGVQAAYPNPTGAKGVHEVV-SKPVINL 214

Query: 189 PGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDAGRFAKEFG 248
            GCPP+  N + T+ + I +GK P LD  NRP +AYG  +H++CERR  FDAG F +EFG
Sbjct: 215 GGCPPSEKNIVGTLMYFIMFGKLPALDMFNRPKWAYGARVHDNCERRGRFDAGEFVEEFG 274

Query: 249 DEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQ 308
           D G +EG+CLY +GCKGP TY NC T +F +    WPV  GH C GC+E           
Sbjct: 275 DHGAKEGYCLYKVGCKGPYTYNNCPTERF-NHHTSWPVLAGHGCMGCSEPNFW-----DD 328

Query: 309 LANVENQTPRSQKPDVNAKEGGNVSAGAIG--LLGGVVGLVAGVSVMAVRELGRQQKKD 365
           +A+ E    R          G + +A  IG  +LG     V G+   AV  +  Q K+D
Sbjct: 329 MADFEKPLGR------QLLHGLDATADTIGAVILGAT---VVGIGAHAVASVFAQAKED 378