Pairwise Alignments

Query, 372 a.a., hydrogenase 2 small subunit from Escherichia coli ECOR38

Subject, 393 a.a., hydrogenase (NiFe) small subunit HydA from Dechlorosoma suillum PS

 Score =  426 bits (1095), Expect = e-124
 Identities = 200/370 (54%), Positives = 257/370 (69%), Gaps = 10/370 (2%)

Query: 8   IHSHGIN--------RRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQEC 59
           IH H I         RR+F++ C A+AAT+GL + A A +AE+V   +RP VIW+  QEC
Sbjct: 11  IHEHVIEAAKRLEMGRREFLQFCTAMAATLGLPAGAEAAVAEAVAVKKRPSVIWLHFQEC 70

Query: 60  TGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDG 119
           TGCTES+LRA HPT+E L+L+ ISL+YHE L AA GHQ+E  K  A++  KGQY+LVV+G
Sbjct: 71  TGCTESMLRAEHPTIEKLILDVISLDYHETLFAAAGHQIEAAKQAAMKANKGQYLLVVEG 130

Query: 120 SIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEV 179
           +IP KD GIYC V G+  +D +++ A  AAAIIAIGSC++WGG+ +   NPTGAV + ++
Sbjct: 131 AIPTKDGGIYCKVGGKTAIDIVKECATDAAAIIAIGSCASWGGMPSTDPNPTGAVGVNKI 190

Query: 180 LPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFD 239
           +  K V+ IPGCPPNP+NFL+TV H +T+G+ P +D+  RP FAY RL+HE+CERR HFD
Sbjct: 191 I-DKPVVTIPGCPPNPYNFLSTVVHFLTFGQLPPVDELGRPKFAYSRLVHENCERRAHFD 249

Query: 240 AGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVG-GVWPVAIGHPCYGCNEE 298
           AGRFA EFGDEGHR+G+CLY LGCKGPETY NC T+ F D G G WPVA GHPC GC E+
Sbjct: 250 AGRFAMEFGDEGHRKGYCLYKLGCKGPETYANCPTILFGDAGAGTWPVACGHPCIGCTEQ 309

Query: 299 GIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVREL 358
           G+GF K IHQ A V    P +  P +  ++G   S GA  +L  V G  AG   M  + L
Sbjct: 310 GVGFQKPIHQTAKVMTYAPPASFPRIVEEQGKGASLGAAAVLAAVAGAAAGAGAMVAKNL 369

Query: 359 GRQQKKDNAD 368
           G     + A+
Sbjct: 370 GLSHAAEEAE 379