Pairwise Alignments

Query, 372 a.a., hydrogenase 2 small subunit from Escherichia coli ECOR38

Subject, 378 a.a., hydrogenase (NiFe) small subunit HydA (RefSeq) from Shewanella sp. ANA-3

 Score =  290 bits (742), Expect = 4e-83
 Identities = 144/292 (49%), Positives = 195/292 (66%), Gaps = 4/292 (1%)

Query: 8   IHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECTGCTESLL 67
           +  HGI RRDFMK  A +   + L    +  +AE+     R P+IW+   ECTGC+ESL+
Sbjct: 33  LQQHGITRRDFMKWSAMVTGMLALPLPFSNLVAEAAELADRVPLIWLHMAECTGCSESLV 92

Query: 68  RATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGSIPLKDNG 127
           RA  P +++L+ + ISLEYHE L AA G Q EEN  +ALE YKG+Y+L V+G++P  +NG
Sbjct: 93  RADTPNLDSLIFDHISLEYHETLMAAAGWQAEENLEHALETYKGRYLLAVEGAVPTANNG 152

Query: 128 IYCMVA--GEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTV 185
            +  V   G   ++ I+ AAE AAAII++G+C+++GGV AA  NPTGA  + EV+  K V
Sbjct: 153 SFLTVGCKGHTGLEIIKHAAEDAAAIISVGTCASFGGVQAAYPNPTGAKGVHEVV-SKPV 211

Query: 186 INIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDAGRFAK 245
           IN+ GCPP+  N + T+ + I +GK P LD  NRP +AYG  +H++CERR  FDAG F +
Sbjct: 212 INLGGCPPSEKNIVGTLMYFIMFGKLPALDMFNRPKWAYGARVHDNCERRGRFDAGEFVE 271

Query: 246 EFGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNE 297
           EFGD G +EG+CLY +GCKGP TY NC T +F +    WPV  GH C GC+E
Sbjct: 272 EFGDHGAKEGYCLYKVGCKGPYTYNNCPTERF-NHHTSWPVLAGHGCMGCSE 322