Pairwise Alignments

Query, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECOR38

Subject, 514 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Ralstonia sp. UNC404CL21Col

 Score =  491 bits (1265), Expect = e-143
 Identities = 262/506 (51%), Positives = 353/506 (69%), Gaps = 8/506 (1%)

Query: 7   VTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPDMPKAAF 66
           VTQ+     D+ TLMSTTD QSYI +AN  FV+VSGF+ +E++G+PHN+VRHPDMP  AF
Sbjct: 7   VTQREYEFPDNATLMSTTDTQSYIAYANAAFVEVSGFSREEIEGKPHNIVRHPDMPPEAF 66

Query: 67  ADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATDEEIAAV 126
           ADMW TLK G+PW+ +VKNRRKNGDHYWVRANA P+VR G+ SGYMS+RT+ T EEIA  
Sbjct: 67  ADMWATLKAGQPWTALVKNRRKNGDHYWVRANATPVVRNGRTSGYMSVRTKPTREEIAGA 126

Query: 127 EPLYKALNAGRT-SKRIHKGLVVRKG---WLGKLPSLPLRWRARGVMTLMFILLAAMLW- 181
           E LYK    G+  S++ HKGL+VR G   W      +P+RWR R     +   L A+ W 
Sbjct: 127 EALYKDFRTGQAGSRKFHKGLIVRTGLMAWRSGFQVMPVRWRIRLTFLTLLPALVALAWG 186

Query: 182 --FVAAPVVTYFLCVLVVL-LASACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDE 238
                A +  +   +LV L LAS   + QI  P+E +   AL VA+GE   V   +R DE
Sbjct: 187 FGMSGAALGGFAGALLVALALASWSLKVQIATPLEKLQELALSVASGESRKVAIADRVDE 246

Query: 239 LGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVAT 298
           +G+TLR + QLGLM RWLI+DV+ QV +V++ S+ +AKG  ++N  T+Q   ++++T ++
Sbjct: 247 IGMTLRTISQLGLMFRWLIDDVAEQVVNVQSASQEIAKGNGDINIRTEQAAASLEETSSS 306

Query: 299 MNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRIGTITSLI 358
           M QM A+V  N+ TA  A+ LS  A+ AAV GG AM  V+ TM  I+ S ++I  I  +I
Sbjct: 307 MTQMTATVASNAETAGQANTLSGEATQAAVNGGRAMEQVVATMSAISQSAKQIADIIGVI 366

Query: 359 NDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASADKV 418
           + IAFQTNILALNAAVEAARAGEQG+GFAVVAGEVR LA RSA AA +I++LI  S DKV
Sbjct: 367 DSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSAGAAKEIKELIGTSVDKV 426

Query: 419 QSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELNLITQKNA 478
           +SGS+ V  AG+TM+DIV QVK V+ +IA IS +T +Q +G++ +++AV+ L+ +TQ+NA
Sbjct: 427 ESGSRLVDDAGKTMDDIVEQVKKVSAMIADISLATAQQTEGITQVSQAVNHLDQVTQENA 486

Query: 479 ELVEESAQVSAMVKHRASRLEDAVMV 504
            LV +SA  +  ++ +A+RL +AV V
Sbjct: 487 TLVGQSAAAAEGLRIQATRLVEAVNV 512