Pairwise Alignments

Query, 355 a.a., outer membrane-stress sensor serine endopeptidase DegS from Escherichia coli ECOR38

Subject, 450 a.a., protease Do (RefSeq) from Shewanella loihica PV-4

 Score =  222 bits (566), Expect = 1e-62
 Identities = 131/330 (39%), Positives = 195/330 (59%), Gaps = 7/330 (2%)

Query: 22  AMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGS 81
           A+PSL  +   +TP   +     +  +++ +R   A    +          +   + LGS
Sbjct: 36  ALPSLAPMLEKTTPAVVAV--AVSGTHVSKQRLPDAFRYFFGPNAPREQVQERPFKGLGS 93

Query: 82  GVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPT 140
           GVI+D ++GYI+TN HVI  AD+I++ L DGR  EA L+G+D+ +D+A+L+I A   +  
Sbjct: 94  GVIIDAKKGYIVTNNHVIEGADEILIGLHDGREIEAKLIGTDAESDVALLQIEAKNLVAL 153

Query: 141 IPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGN 200
              ++  +  +GD  +AIGNP+ LGQT+T GI+SA GR GL     +NF+QTDA+IN GN
Sbjct: 154 KRADSDELK-VGDFAVAIGNPFGLGQTVTSGIVSAMGRSGLGIEMLENFIQTDAAINSGN 212

Query: 201 SGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIG 260
           SGGALVN  GEL+GINT        G    GIGFAIP  +   ++D+LI  G V RG +G
Sbjct: 213 SGGALVNLNGELIGINTAIV---APGGGNVGIGFAIPANMVNNLVDQLIEHGEVRRGVLG 269

Query: 261 IGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD 320
           + GR++    AQG G+D   G  VNEV PD  A  AGI+  D+I+SV++KP  S  E   
Sbjct: 270 VSGRDLDSELAQGFGLDSQHGGFVNEVMPDSAADKAGIKAGDIIVSVNDKPIKSFQELRA 329

Query: 321 QVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
           ++  +  G+ + + ++RD  + T+   + E
Sbjct: 330 KIGTMGAGAKVKLGLIRDGDEKTVTAVLGE 359



 Score = 31.6 bits (70), Expect = 4e-05
 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 11/111 (9%)

Query: 243 KIMDKLIRDG--RVIRGYIGIGGRE-------IAPLHAQGGGIDQLQGIVVNEVSPDGPA 293
           K+   LIRDG  + +   +G   ++       + P+ A     +  +G+ + E++   PA
Sbjct: 339 KVKLGLIRDGDEKTVTAVLGEASQQTETAAGAVHPMLAGATLENNKKGVEITEIAQGSPA 398

Query: 294 ANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTL 344
           A +G+   D+I+ V N+  I  L+ +    + + G+V  + ++R D  L L
Sbjct: 399 AASGLLKGDIIVGV-NRTRIEDLKELKAELKEQHGAV-ALKLLRGDNSLYL 447