Pairwise Alignments

Query, 327 a.a., dipeptide ABC transporter ATP-binding protein from Escherichia coli ECOR38

Subject, 332 a.a., oligopeptide ABC transporter, ATP binding protein from Phaeobacter inhibens DSM 17395

 Score =  312 bits (800), Expect = 6e-90
 Identities = 158/317 (49%), Positives = 214/317 (67%), Gaps = 1/317 (0%)

Query: 3   LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGR 62
           +L V  L   F        AV  +S+ V+QGEV+G+VGESGSGKSV+  +I+GL    G 
Sbjct: 9   VLEVRNLCTTFKRGGVLLPAVRDVSFDVRQGEVLGLVGESGSGKSVTLRSILGLTRRHGE 68

Query: 63  VMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGG 122
           V  E + + G+D+ R+S+++ R + G EVAMIFQ+PMTSLNP  TVG Q+ E +K H   
Sbjct: 69  VTGE-VRWQGRDISRLSDRQLRQVRGGEVAMIFQEPMTSLNPLLTVGLQLTETLKAHTDL 127

Query: 123 NKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAIAIACRPKLLIADEPTT 182
           +++ RR RAI++L+ VGIP  ASRL  YPHQ SGGM QRVMIAIA+A  PKLL+ADEPTT
Sbjct: 128 SRAARRNRAIEMLDHVGIPAAASRLQDYPHQFSGGMRQRVMIAIALAAEPKLLLADEPTT 187

Query: 183 ALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHAIF 242
           ALDVTIQAQI++L+L L Q+ NM ++L+THDL +VA+    + VMYAG++VE G    + 
Sbjct: 188 ALDVTIQAQILDLILRLSQEMNMGVILVTHDLGVVAQTCENVAVMYAGRIVEQGAVRQVL 247

Query: 243 HAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEP 302
            APRHPYT  L+R++P+    +  L S+PG  P     P GC   PRC   T+ C ++ P
Sbjct: 248 RAPRHPYTAGLMRSVPQDIAPRTPLYSVPGTPPSLEMLPRGCAYAPRCEVRTEACLSKRP 307

Query: 303 ALNMLADGRQSKCHYPL 319
           AL  ++ GR++ C  P+
Sbjct: 308 ALETISAGRRAACFNPV 324