Pairwise Alignments

Query, 354 a.a., colicin M resistance protein from Escherichia coli ECOR38

Subject, 394 a.a., geranylgeranyl reductase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 78/342 (22%), Positives = 134/342 (39%), Gaps = 36/342 (10%)

Query: 4   FDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGL 63
           +DV ++G GP+G+  A  LA   + +AL  +      G  KPCGG + P     F     
Sbjct: 3   YDVVVVGGGPSGATAAEDLARAGKKVALIDR-----AGRIKPCGGAIPPRLIADF----- 52

Query: 64  TLPVDVIANPQIFSVKTVDVAASLTRNYQRSYIN-----INRHAFDLWMKSLIPASVEVY 118
               D+  +  +  + T  + +   R+      N     ++R  FD +++     +    
Sbjct: 53  ----DIPESQIVAKINTARMVSPTARHVDIPIENGFVGMVDREFFDEFLRDRAAKAGADR 108

Query: 119 HDSLCRKIWREDDKWHVIFRADGWEQHITAR--YLVGADGANSMVRRHLYPDHQIRKYVA 176
           H     +I R +    V++R     + +  R   ++GADGA S V R   P      YV 
Sbjct: 109 HTGTFLRIDRSEKGTWVVYRDKTSREEVAIRTKLIIGADGARSDVARAEVPGGSTIPYVI 168

Query: 177 IQ-------QWFAEKHPVPFYSCIFDNAIT-DCYSWSISKDGYFIFGGAYPMKDGQTRFT 228
                    +  ++K+       I+D  ++ D Y W +   G     G     DG     
Sbjct: 169 AYHEIIKAPEGVSDKYDPTRCDVIYDGVVSPDFYGW-VFPHGKSASVGMGTGVDGTDLKA 227

Query: 229 TLKEKMNAFQFQFGKAVKSEKCTV-LFP-SRWQDFVCGKDNAFLIGEAAGFISASSLEGI 286
             K   ++      + ++ E   + L P  +W +   G+D   L G+AAG ++ SS EGI
Sbjct: 228 ATKLLRDSAGLSECETIRKEGAPIPLKPLDKWDN---GRD-LVLAGDAAGVVAPSSGEGI 283

Query: 287 SYALDSAEILRSVLLKQPEKINATYWRATRKLRLKLYGKIVK 328
            YA+    +     L+             RK  LK +G + +
Sbjct: 284 YYAMAGGRVAGEAALECLRTGQVKALAKARKRFLKEHGTVFR 325