Pairwise Alignments

Query, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Escherichia coli ECOR38

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

 Score =  408 bits (1048), Expect = e-119
 Identities = 207/293 (70%), Positives = 251/293 (85%), Gaps = 1/293 (0%)

Query: 1   MKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVL 60
           MKKL TL+SA  LS +VS  A A+DT+A+V+STLNNPFFV++KDGA+ +A +LGYNL+VL
Sbjct: 3   MKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVL 62

Query: 61  DSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGEV 120
           DSQN+P+KEL+NV+DLTVRG K +LINPTDSDAV NA+++AN++ IPV+TLDR A++GEV
Sbjct: 63  DSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEV 122

Query: 121 VSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVL 180
           VSHIASDNV+GG++AG +I  K G  AKVI+L+GIAGTSAARERGEGF  AV   K  +L
Sbjct: 123 VSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGSKMQLL 182

Query: 181 ASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGT 240
           ASQPADFDRTKGLNVM+NLL A+PDVQAVFAQNDEMALGALRA+Q +GKS VM+VGFDGT
Sbjct: 183 ASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKS-VMIVGFDGT 241

Query: 241 PDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVK 293
            DG  AV  G+LAAT+AQ PD IGA G+ETADK+LKGEKV+A  PV LK++ K
Sbjct: 242 DDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVIAK 294