Pairwise Alignments

Query, 475 a.a., DNA recombination protein RmuC from Escherichia coli ECOR38

Subject, 491 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  424 bits (1091), Expect = e-123
 Identities = 213/438 (48%), Positives = 312/438 (71%), Gaps = 1/438 (0%)

Query: 17  AIGWLFASYQHAQQKAEQLAER-EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSI 75
           AI  L AS +  +    QL ++ E  +  L  ++ Q  +++    + +    +    Q  
Sbjct: 52  AIALLEASLEEKRSDVAQLNQKLEHQINLLGMSQAQAQRADDLEQQLQQSQRKQMETQLA 111

Query: 76  NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135
            +   A  + +T + E  QQ  +DKI+ +  SE RL++QFENLAN+IF+   +R+  ++ 
Sbjct: 112 LSKSNAIQQTLTVKFETEQQALEDKIKHLHESETRLTQQFENLANKIFDAKAQRLQHESE 171

Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195
           Q L+++LSP ++QL+GFR+QVQ+S+  E  ER  L H++ +L+ LN QM+Q+AINLT+AL
Sbjct: 172 QQLSNVLSPFKQQLEGFRKQVQESYTVEQNERSALKHQLESLKALNLQMSQDAINLTKAL 231

Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255
           KGDNK QGNWGEV+L RVL+ SGLREG+EYETQ  +++D   R +PDVIV LP+ KDVVI
Sbjct: 232 KGDNKQQGNWGEVILERVLQESGLREGHEYETQQDLKHDNGKRFKPDVIVHLPENKDVVI 291

Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315
           DAKM+LVAYERYFN+ED+  + +A++EH  S+RNHI+ L +KDYQ L GL +LDYVLMFI
Sbjct: 292 DAKMSLVAYERYFNSEDETVKAAAIKEHCLSIRNHIKGLSQKDYQALHGLTSLDYVLMFI 351

Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375
           P+EPAFLLAL+ +P LI  AL+NNIMLVSPT LLVALRTI N+WRYE+Q++NAQ IA +A
Sbjct: 352 PLEPAFLLALEHEPSLINYALENNIMLVSPTNLLVALRTINNIWRYEYQNQNAQLIAKQA 411

Query: 376 SKLYDKMRLFVDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435
            K+YDK+  +++DM  IG++++    +Y+ AM KLS+G+GN++ QA   + +GV   +++
Sbjct: 412 GKIYDKLCGYLEDMEKIGRAVESLDKHYQAAMGKLSTGKGNLIRQAHQMQQMGVTTNKQL 471

Query: 436 NPDLAEQAVSQDEEYRLR 453
           +  L ++A+S   E+ ++
Sbjct: 472 DNQLLDKALSDHLEHDIK 489