Pairwise Alignments

Query, 181 a.a., menaquinone-dependent protoporphyrinogen IX dehydrogenase from Escherichia coli ECOR38

Subject, 177 a.a., protoporphyrinogen oxidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  139 bits (349), Expect = 4e-38
 Identities = 72/170 (42%), Positives = 104/170 (61%), Gaps = 1/170 (0%)

Query: 3   TLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQWENYDRVVIGASIRYGHY 62
           TLIL+ST DGQTR+I   + +  +  G Q  +A++   +    E  D+V++GASIRYG +
Sbjct: 4   TLILYSTVDGQTRKICERIKARCEAAGEQVTMADIAEADA-LLETADKVLVGASIRYGKH 62

Query: 63  HSAFQAFVKKHATQLNSMPSAFYSVNLVARKPEKRTVQTNSYARKFLMNSQWRPDRCAVI 122
             A   F  ++   L +  + F++VN+VARKPEK T  TN Y +KFL  SQW+P +  V 
Sbjct: 63  RPALFEFATRYGAVLGTKINGFFTVNVVARKPEKNTPATNPYMQKFLQLSQWQPQQLGVF 122

Query: 123 AGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIA 172
           AG + YPRY  +DR MI+ IM ++ G TD +    +TDW++V  FA   A
Sbjct: 123 AGKIDYPRYGLFDRTMIRFIMWITKGPTDIKGTFEFTDWDKVDGFADTFA 172