Pairwise Alignments

Query, 343 a.a., multidrug efflux transporter periplasmic adaptor subunit MdtN from Escherichia coli ECOR38

Subject, 287 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (301), Expect = 4e-32
 Identities = 101/327 (30%), Positives = 147/327 (44%), Gaps = 57/327 (17%)

Query: 16  LLVVALALVALVFVIWRVDS-APSTNDAYASADTIDVVPEVSGRIVELAVTDNQAVKQGD 74
           L +VA+A+ A  F +W+     P T DA   AD + + P+VSG + EL   DNQ VK GD
Sbjct: 11  LCMVAVAIFA-GFHLWQYYMLTPWTRDARIRADVVVIAPDVSGWVRELKAVDNQQVKAGD 69

Query: 75  LLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAAKQAT 134
           +L  ID   +EA L                                   EKARA  +   
Sbjct: 70  VLLNIDRERFEAAL-----------------------------------EKARAVVQTRQ 94

Query: 135 DTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGVDALVAQRAA 194
             L   E                  A R A     A+  + +  A   +G+     + A 
Sbjct: 95  QQLGLRE----------------HEASRRAALGPQAISAELRENAQINAGIARGELREAQ 138

Query: 195 VEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRET 254
            EA +A  +L+L  + V AP +G + +L+ + G + +A +P+  LID   +YV A F ET
Sbjct: 139 AEAKVA--ELNLARSQVLAPRNGHITNLRLAEGNYVNAGQPVMALIDDSTFYVQAYFEET 196

Query: 255 DLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQ 314
            L  IR G P  I LMS +G   EG V+SI  G+   +       L +V  + NWVR+AQ
Sbjct: 197 KLPRIRVGDPVKIWLMS-AGHALEGHVESISRGITDRNTNPDAQLLAEVEPTFNWVRLAQ 255

Query: 315 RFPVKIMVEKPDPEMFRIGASAVANLE 341
           R PV+I ++K  PE   + A   A+++
Sbjct: 256 RIPVRIKLDKV-PEGVNLSAGMTASVQ 281