Pairwise Alignments

Query, 1259 a.a., autotransporter assembly complex protein TamB from Escherichia coli ECOR38

Subject, 1222 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

 Score =  406 bits (1044), Expect = e-117
 Identities = 345/1284 (26%), Positives = 595/1284 (46%), Gaps = 103/1284 (8%)

Query: 9    LGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRW----VPGLDIGKVTGGWRDLTLSD-V 63
            LG+V+++ + LG+   L+GT++G         RW    VPGL +    G       +D +
Sbjct: 9    LGLVLLLAIALGT---LLGTSAG--------SRWLLTQVPGLTVEAFEGRLGQRWQADRL 57

Query: 64   RYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEEEDSG 123
             +EQ G  V+     LA    CL   ++CI++L    I++N      PPSE     E   
Sbjct: 58   IWEQDGSRVEVQQPRLAWSPACLLKRTLCIDELVTGSIELNF-----PPSEPDPNAEPFS 112

Query: 124  PLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGLLIALP 183
              D++ P  + + R+ +  V +  D   +  +   +  NW+   L ++   ++   + L 
Sbjct: 113  LPDINLPLALQVERIEIGQVTLN-DAEQLRRLQLQA--NWRADGLDIQRLDVRRDDLDLT 169

Query: 184  KVAEAAQEEVVEPKIENPQPDEKPLGETLKDLFSRPVLPEMTDVHLPLNLNIEEFKGEQL 243
                                  +P G     L  +  L    +    L + IE    EQL
Sbjct: 170  LTGRL-----------------QPSGNWPLQLQGQAALQSPDEQPWALMIAIEGDLREQL 212

Query: 244  RVTGDTDITVRTMLLKVSSIDGNTKLDALDIDSSQGI-VNASGTAQLSDNWPV----DIT 298
            +      + V +      S+ G+ +  ALD      + +NA G   L D        D+ 
Sbjct: 213  Q------LQVESQGYLQGSLSGHVR--ALDEQLPATVRLNADGFKALPDLPETLRLDDLE 264

Query: 299  LNSTLNVEP---LKGEKVKLKVGGALREQLEIGVNLSGP------VDMDLRAQTRLA--- 346
            L ++ N++    L G       GGA+R  LE  V+ +G       +D   +   RL+   
Sbjct: 265  LTASGNMQDGYRLLGTTQLPGEGGAVRVALEGVVSTTGAQIATLELDAGQQRHVRLSGDV 324

Query: 347  --EAGLPLNVEVNSKQLYW----PFTDEKLYQADDLKLKLTGKMTDYTLSMRTAVKGQEI 400
              + GL  N ++  +   W    P  +E      +LK ++  +  +Y  +  +A+ G   
Sbjct: 325  DWQDGLAANADLLWRDFPWRRFYPEIEEPPVTLRELKAQIQYQDGNYLGNFESAMTG--- 381

Query: 401  PPATITLDA--KGNEQQVNLDKLTVAALEGKTELKTLLDWQQAISWRGELTLNGIDTAKE 458
            P    TL++   GN + V+L +L + A +G       + +   I W+ +L L+ +D A  
Sbjct: 382  PAGDFTLNSPVSGNLEAVHLPQLELRAGQGSATGSVSVGFADGIDWKADLALSDLDPAYW 441

Query: 459  FPEWPSKLNGLIKTRGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGL 518
              E P  L G ++++G+L     Q E   L + G ++    ++     G    +W +P +
Sbjct: 442  LAELPGNLGGTLQSQGALRDERLQAEA-SLDINGRLRGQNTSLQLQASGEGE-RWNLPVI 499

Query: 519  HLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLAD 578
             L +G N    +G    + L+    +    L    P L G   G V + GT  AP    +
Sbjct: 500  DLRMGDNRVHGEGTWA-QTLDGRVQLELRRLAQLWPDLRGQLSGEVTLGGTAAAPSGKIE 558

Query: 579  ITARGLRWQELSVAQVRVEGDIKSTDQIAGKLDVRVEQISQPDVSINLVTLNAKGSEKQH 638
            ++ R L +Q+  + ++ ++G +   ++  G+L +  E I   +  +  + +NA GS  +H
Sbjct: 559  LSGRNLAYQDNRLRRLNLQGQLSDGER--GRLVLNAESIRAGETDLGALQVNADGSADKH 616

Query: 639  ELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTPVGPWSLTRDIALDYRNKEQK 698
            +  LR+QG  +   L + G    ++  W G L+          W+L R   L  R  + +
Sbjct: 617  QADLRLQGPLLDLALAVDGGLSGED--WLGRLTRGELSAEQQNWALQRPATLQ-RFADGR 673

Query: 699  ISIGPHCWLNPNAELC-VPQTINAGAEGRAVVNLNRFDLAMLKPFMPETTQASGIFTGKA 757
            + +G HCWL+  A LC V Q I    + R    L  F L  L  ++PE  +  G     A
Sbjct: 674  LELGAHCWLSGPASLCAVDQRIMP--DPRIRYRLRDFALQSLAEYLPEDFRWQGELN--A 729

Query: 758  DVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRL 817
            D+  D    G P G + +      +     D      +QTL L + L   R +     + 
Sbjct: 730  DIELDLPASG-PNGRVQVDAGPGVLRIRDADEWHDFPYQTLVLNSRLLPERIDSELRFQG 788

Query: 818  TNNGQFDGQVQVTDPQGRRNLGGNVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQ 877
               G+ D QV++      + + G   +   +LA+  P     E+  G ++ + +L G ++
Sbjct: 789  GELGELDVQVRIDPRPENKPIYGEFRLSGLDLAVARPFVPMVERLRGQLNGSGQLSGSLR 848

Query: 878  SPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMRSTLAGTVRT-QQGEIYLNGDADW 936
             P L GQL ++G +I G+ +P   +  ++ +   G R ++ G  R   QG   L+G  DW
Sbjct: 849  QPTLNGQLLLSGGEIAGSELPTTFEDLRVRMLIEGERLSIDGDWRAGDQGRGNLSGTLDW 908

Query: 937  SQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDL 996
                +    +  KGS++ + V P   ++V PD+    +     + GRV VP   I V +L
Sbjct: 909  RDAVDLDLAI--KGSRLPVVVEPYADLEVEPDLRIVLSGQDLAVSGRVAVPRGAITVREL 966

Query: 997  PESAVGVSSDVVMLNDNLQPEEAKTASIPINSNLIVHVGNN-VRIDAFGLKARLTGDLNV 1055
            P + V VS D V++    +  E     + +  ++ V VG + +R   FGL A L G L++
Sbjct: 967  PPTTVRVSEDTVIVG---REAEEPATPLAVKMDIDVEVGQDRLRFTGFGLTADLAGYLHI 1023

Query: 1056 VQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDV 1115
              +   L   G++ +  GR+ AYGQ L +R+ ELLF+G   QP+LNIEAIR  +A  ++V
Sbjct: 1024 GDN---LDARGELQLKNGRYRAYGQRLTIRRAELLFTGLISQPFLNIEAIRRIEA--ENV 1078

Query: 1116 IAGVRVTGLADEPKAEIFSDPAMSQQAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQS 1175
            +AG+R+TG A++P+ ++FS+PAMSQ+ AL+YL+ G+ L +D  DS  +    +GLG+A S
Sbjct: 1079 VAGLRITGSAEQPRIDVFSEPAMSQEQALAYLVLGRPLGADTGDSNLLAQAALGLGLAGS 1138

Query: 1176 GQIVGKIGETFGVSNLALDTQGVGDSSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRL 1235
              I G + +  G+ +  LDT+G G  + VV +G +   L ++YGVG+F+   T+ LRY+L
Sbjct: 1139 SSITGGLAQRLGIQDFQLDTEGTGAGTSVVATGRLTERLALRYGVGVFEPTNTIALRYQL 1198

Query: 1236 MPKLYLEAVSGVDQALDLLYQFEF 1259
              +++LEA SG+  +LD+ Y+ +F
Sbjct: 1199 TRRIFLEAASGLASSLDVFYRRDF 1222