Pairwise Alignments

Query, 1259 a.a., autotransporter assembly complex protein TamB from Escherichia coli ECOR38

Subject, 1254 a.a., DUF490 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  754 bits (1948), Expect = 0.0
 Identities = 423/1271 (33%), Positives = 709/1271 (55%), Gaps = 40/1271 (3%)

Query: 4    WKK-ISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVPGLDIGKVTGG-WRDLTLS 61
            W K +S+ ++++++LL+ ++A  + T  GLH+V   A + +P L + +  G  +   TL 
Sbjct: 8    WTKWLSMSLLVLVILLVLALAGALFTNPGLHVVLWGAQQALPQLKVEQAQGALFPRFTLQ 67

Query: 62   DVRY--EQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEE 119
             V Y   +  ++     L LA+   CL   S+CIN+LAL  +++++ S  +  SE   +E
Sbjct: 68   GVNYADSELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKLDLPS--LAESEPAPDE 125

Query: 120  EDSGPL-DLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGL 178
             DS PL D+STP PI L ++AL ++ + I    V+    T+  +WQ   L +  T  +G+
Sbjct: 126  PDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQTEWQGI 185

Query: 179  LIALPKVAEAAQEEVVEPKIENPQPDEKPLGETLKDLFSRPVLPEMTDVHLPLNLNIEEF 238
             +AL + +EA+ E         P+  +    ++ + L       ++ DV +PL++ +  F
Sbjct: 186  RLALAE-SEASTE---------PEAAQAATSDSAEPL-------QLPDVMIPLHIELARF 228

Query: 239  KGEQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDSSQGIVNASGTAQLSDNWPVDIT 298
                 R+  +T I V  + L+ ++   +  + +L++   +     +  A LS ++P+ + 
Sbjct: 229  DIRDFRLEQETPIIVNHLALQATAAQHDVSISSLELSMPELDAQLNAQATLSQDYPIQLE 288

Query: 299  LNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNS 358
            L S +++   KG+ + L   G+L + L +  NL       L +   L +A +P +++++ 
Sbjct: 289  LRSQVHLADFKGQTLSLAAQGSLAD-LTVQANLDSLAQAQLNSHFNLLDADIPFDLQLSQ 347

Query: 359  KQLYWPFTDEKLYQADDLKLKLTGKMTDYTLSMRTAVKGQEIPPATITLDAKGNEQQVNL 418
             +  WP   E  Y  +  +L + G +  Y  +++ A++G+++P  ++ L   GN  +V L
Sbjct: 348  VKAQWPMLGEGDYHVEVPELSIQGSLAKYQFALQGALQGKDLPNVSLALQGHGNLDEVAL 407

Query: 419  DKLTVAALEGKTELKTLLDWQQAISWRGELTLNGIDTAKEFPEWPSKLNGLIKTRGSLYG 478
              L V  L G      + +W+  ++W   L L  I    ++PE   K++G + T G+L  
Sbjct: 408  QSLKVDTLGGLVTGNAVANWKNPLNWAARLNLKNIQPGLQWPEAEGKISGELDTSGALTE 467

Query: 479  -GTWQMEVPELKLTGNVKQNKVNVDGTL-----KGNSYMQWMIPGLHLELGPNSAEVKGE 532
             G WQ+EV  L + G ++   + + G L     +G   +     G+ L  GPNS   KG+
Sbjct: 468  QGGWQVEVSRLAIKGVLRDYPLKMLGELSASDVQGQGDITLQTKGVSLVHGPNSLTAKGQ 527

Query: 533  LGVKDLNLDATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQEL-SV 591
            L  K   +   ++ P L  +LP   G   G V +RG ++ P++   + A  L+WQEL S+
Sbjct: 528  LS-KQWRMSVELDVPDLSKSLPDAKGKVIGDVLLRGDLKQPRVKLVLDADSLQWQELGSI 586

Query: 592  AQVRVEGDIKSTDQIAGKLDVRVEQISQPDVSINLVTLNAKGSEKQHELQLRIQGEPVSG 651
              V ++G++    +  G+L ++V  I   D  I+ V L A+GS+++HE+ L +  +  S 
Sbjct: 587  GHVTLQGNLVPLPEPQGELTLQVRAIQYQDQRIDTVDLKAQGSQRKHEVTLDVTSDLAST 646

Query: 652  QLNLAGSFDRKEE-RWKGTLSNTRFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNPN 710
             L + G    +   RW+G L      +P G W L +  AL +  + +++++  HCW+   
Sbjct: 647  SLAMNGRLRTEPTLRWQGELERMWLNSPQGQWLLQQATALSFDQRTERVTVAAHCWVQGE 706

Query: 711  AELCVPQTINAGAEGRAVVNLNRFDLAMLKPFMPETTQASGIFTGKADVAWDTTKEGLPQ 770
            A LC+ +    GA G   + + +FD   L   +P+ T+ SG   G+    W    +  PQ
Sbjct: 707  ASLCLEEEAELGARGETRLAIKQFDFKQLAGVLPKETKLSGGLNGQVWAKW--APKAAPQ 764

Query: 771  GSITLSGRNVQVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQVT 830
                L     QVTQ +N + +   +     +A+L  N+ +  W +  T+NG   G +Q+ 
Sbjct: 765  LQANLELTQGQVTQKLNKS-VTFGWDKAQFSAQLAKNQLQASWLLDATDNGDLSGNIQIA 823

Query: 831  DPQG-RRNLGGNVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTG 889
            D +  ++ + G++N+  FNL  + P+     +A   ++A+++  G +  PQL G++ +  
Sbjct: 824  DVRAEQKTMLGSLNLTTFNLDFLQPLIGELSEAKSNINADVQFHGPMLHPQLNGEIAIND 883

Query: 890  VDIDGNFMPFDMQPSQLAVNFNGMRSTLAGTVRTQQGEIYLNGDADWSQIENWRARVTAK 949
            + + G   P D+Q  Q+++ FNG ++ L   ++T  G + ++GDADW QIE+WR +    
Sbjct: 884  IRVKGEISPVDVQSGQVSLKFNGYQAVLNADIQTTDGLLEVDGDADWQQIEDWRLKARVH 943

Query: 950  GSKVRITVPPMVRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVM 1009
               + + +PPMVR+ V PD+     P L  + G + +PW RIVV +LP SA+GVS D ++
Sbjct: 944  APSMMVELPPMVRVKVIPDLTLTMQPQLARVTGNIALPWGRIVVEELPPSAIGVSKDQIL 1003

Query: 1010 LNDNLQP-EEAKTASIPINSNLIVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQI 1068
            LN + +P  + +     + S++ V +G++ ++ AFGL+  L G LNV Q  +G  + G++
Sbjct: 1004 LNADFEPLTDKERIPFSVESDVNVQIGDDFQLSAFGLQGNLVGRLNVAQKDKGPFILGEV 1063

Query: 1069 NIPEGRFHAYGQDLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEP 1128
            NI  G++ ++GQDL +++G++L +GP DQPYL I AIRNP+ T+D V+AGVRV+G +DEP
Sbjct: 1064 NIRNGQYRSFGQDLQIKEGKILMNGPVDQPYLAITAIRNPNNTQDGVVAGVRVSGPSDEP 1123

Query: 1129 KAEIFSDPAMSQQAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGV 1188
               IFS+PAM Q  ALSYLLRGQ ++ +   +A MT+ LIGL +AQSG++VG+IG+ FGV
Sbjct: 1124 SLTIFSEPAMPQANALSYLLRGQNIDGEAGGNA-MTTTLIGLSLAQSGKLVGEIGQAFGV 1182

Query: 1189 SNLALDTQGVGDSSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVD 1248
             +L LDT G GD SQV VSGY+LPGLQVKYGVGIF+S+   T+RYRLM  LYLEAVSGVD
Sbjct: 1183 QDLQLDTAGSGDDSQVTVSGYILPGLQVKYGVGIFNSVGEFTVRYRLMQDLYLEAVSGVD 1242

Query: 1249 QALDLLYQFEF 1259
             A+DLLYQFEF
Sbjct: 1243 SAVDLLYQFEF 1253