Pairwise Alignments

Query, 1259 a.a., autotransporter assembly complex protein TamB from Escherichia coli ECOR38

Subject, 1500 a.a., Protein of unknown function DUF490 (NCBI) from Rhodospirillum rubrum S1H

 Score = 58.9 bits (141), Expect = 3e-12
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 20/241 (8%)

Query: 1019 AKTASIPINSNLIVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAY 1078
            A    IP+  ++ V +   V +   G+ +   G LNV        + G I    G+    
Sbjct: 1260 AAQTPIPVLLDITVSLPRRVYVRGRGVDSEWEGKLNVGGTAAAPKVVGTITTLRGQADVL 1319

Query: 1079 GQDLIVRKGELLF-SGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPA 1137
            G+   +RKGE+ F  G P  P L++ A  +      +V+A V V+G A +P+    S+PA
Sbjct: 1320 GRTFSLRKGEVRFDGGMPIDPLLDVVAAND----TGEVVALVSVSGTASDPQIGFSSEPA 1375

Query: 1138 MSQQAALSYLLRGQ------GLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNL 1191
            + +   +S +L G+        E+ Q   AA  S L G+G    G ++  +    G+  L
Sbjct: 1376 LPKDEVISQILFGKTSGELSAFEAIQLAEAA--SQLAGVG--GGGGVIQSLRAMTGLDVL 1431

Query: 1192 ALDTQGVGDSSQVVVSGYVLPG--LQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQ 1249
             L  +G    + +    Y+     + V+ G+G+ DS   + ++  L P + LE+  G   
Sbjct: 1432 KLG-EGATGGTTLEAGTYLRENVYIGVEQGLGLQDS--AIEVQVELTPSINLESKVGATG 1488

Query: 1250 A 1250
            A
Sbjct: 1489 A 1489



 Score = 33.1 bits (74), Expect = 2e-04
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 531 GELGVKDLNLDATINAPG-LDNALPGLG-GTAKGLVKVRGTVEAPQLLADITARGL 584
           G+ G  DL LD  ++  G L   +P LG GTA+  ++  G++EAP   A+ T   L
Sbjct: 348 GKEGALDLVLDGALHGAGALGGLVPDLGLGTARVSLRAGGSLEAPTARAEATINAL 403