Pairwise Alignments

Query, 938 a.a., isoleucine--tRNA ligase from Escherichia coli ECOR38

Subject, 940 a.a., Isoleucyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  776 bits (2004), Expect = 0.0
 Identities = 412/948 (43%), Positives = 583/948 (61%), Gaps = 45/948 (4%)

Query: 2   SDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYAN 61
           +DYKST+ LP T FPM+  LA++EPG+LARW   D+Y  +R   KG++ F+LHDGPPYAN
Sbjct: 3   ADYKSTVFLPTTDFPMKAGLAEKEPGILARWEKLDIYARLRERSKGREQFVLHDGPPYAN 62

Query: 62  GSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEY---GKPGEKFT 118
           G +H GH++NKILKD+I +S+ + G D+ YVPGWDCHGLPIE K+E+ Y   G+  ++  
Sbjct: 63  GHLHNGHALNKILKDVITRSQQMLGKDANYVPGWDCHGLPIEWKIEERYRAQGRRKDEID 122

Query: 119 AAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHL 178
             EFR +CR++A   +  QR++F RLG+ GDW  PY TM F  EA I+R LGK +  G L
Sbjct: 123 VIEFRRECRQFAEEWIAIQREEFKRLGITGDWKRPYTTMAFAAEAQIVRELGKFLMAGDL 182

Query: 179 HKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLV 238
           +KGAKPV W V  ++ALA+AEVEY D TS +I + F  +       +  V+ + G  S+V
Sbjct: 183 YKGAKPVLWSVVEKTALADAEVEYQDHTSTTIWIRFPVI-------RTPVTALEGA-SVV 234

Query: 239 IWTTTPWTLPANRAISIAPDFDYVLVQID----------GQAVILAKDLVESVMQRIGVT 288
           IWTTTPWT+P NRA++  P  DYV+ ++           G+ + +  DL++ V+++  +T
Sbjct: 235 IWTTTPWTMPGNRAVAYGPGMDYVVFRVTATAEGSLARAGERIAVCADLLDDVLKQAKIT 294

Query: 289 DYTILGTVKGAELELLRFTHPFMG----FDVPAILGDHVTLDAGTGAVHTAPGHGPDDYV 344
           +   +  VKGA+L      HP+ G    F+VP + G  VT + GTG VH APGHG DDY 
Sbjct: 295 EIEEIAHVKGADLAGTVCRHPWAGKGYDFEVPLLSGLFVTTEQGTGFVHMAPGHGEDDYF 354

Query: 345 IGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYP 404
           +    G+   + V  DG Y+    P   G +VFK    +VA + + GALL    + HSYP
Sbjct: 355 LCLANGIAPPDTVDGDGLYMDHV-PGFAGKHVFKVAPDIVAAMIDAGALLAQGSLTHSYP 413

Query: 405 CCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCI 464
             WR K P+IFR TPQWF+SM++ GLR ++L  I   +W+P  G+ RI +M+ +RPDWC+
Sbjct: 414 HSWRSKAPLIFRNTPQWFISMEKNGLRDKALAAIDETRWVPPQGRNRIRAMIESRPDWCV 473

Query: 465 SRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEAD-- 522
           SRQR+WGVP+++FV K  + L  R   + E +A+    +G  AW+  D +  LG E D  
Sbjct: 474 SRQRSWGVPIAIFVDK-RDGLPLRDAAVTERIAQAFGAEGADAWFTGDPRRFLGAEHDPE 532

Query: 523 QYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKG 582
            +  V D ++VWFDSGSTH+ V++ R +     AD+YLEGSDQHRGWF +SL+ S   +G
Sbjct: 533 NFEPVRDIVEVWFDSGSTHAFVLEARDDLKW-PADLYLEGSDQHRGWFHTSLLESCGTRG 591

Query: 583 KAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSD 642
           +APY  VLTHGF +D +G K+SKS GN  SPQ V++ +GADI+RLWV S+DYTG++    
Sbjct: 592 RAPYDAVLTHGFLLDEKGDKLSKSKGNAESPQKVVSSVGADIMRLWVVSSDYTGDIRFGP 651

Query: 643 EILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKA 702
           EILK+  D+YRR+RNT RFLL  L GFD A+ +     M  L+RW +         +   
Sbjct: 652 EILKQTTDTYRRLRNTLRFLLGALAGFDKAERIDDIAAMPELERWVLHRLSEIDVKVRGC 711

Query: 703 YEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRW 762
            +A+ FHE+ Q L  FC+V++ +FYLDI KD  Y   A S+ RR+C+T +  + + LV+W
Sbjct: 712 CDAFSFHEMFQELHGFCAVDLSAFYLDIRKDALYCDGAGSLRRRACRTVIDTVFDCLVKW 771

Query: 763 MAPILSFTADEVW-GYLPGEREKYVFTGEWYEGLFGLADSEAMNDAF---WDELLKVRGE 818
           +AP + FTA+E W    P E +   F        F     +  +DA    W ++ ++R  
Sbjct: 772 LAPFVCFTAEEAWLTRFPSEDDSVHFQS------FPTVPGDWRDDALAERWTKVRRLRRV 825

Query: 819 VNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYND--A 876
           +   +E ARA+K +G SL+AA  ++A  EL      L  ++  + +TS  T+ D  D   
Sbjct: 826 ITGALEVARANKTIGASLQAAPVVHAPAELLNACAGL--DMAEISITSDITLTDSADQPI 883

Query: 877 PADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRC 924
           P  A   + + G+ V ++ AEGEKC RCW    DVG  A H  +CGRC
Sbjct: 884 PEGAYTLDEVAGVGVVVALAEGEKCQRCWEILPDVGTHA-HEGLCGRC 930