Pairwise Alignments

Query, 938 a.a., isoleucine--tRNA ligase from Escherichia coli ECOR38

Subject, 991 a.a., isoleucyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  679 bits (1752), Expect = 0.0
 Identities = 407/991 (41%), Positives = 551/991 (55%), Gaps = 82/991 (8%)

Query: 2   SDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKG--KKTFILHDGPPY 59
           + YK TLNLP+T FPMR  L KREP  LARW +  +Y  +R   K   +  F LHDGPPY
Sbjct: 9   NQYKDTLNLPKTDFPMRAGLPKREPEWLARWEEMGIYDRLREKAKAETRPAFTLHDGPPY 68

Query: 60  ANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEY---GKPGEK 116
           ANG++HIGH++NKILKD++V+S+ + G D+ Y+PGWDCHGLPIE K+E++Y   G+  ++
Sbjct: 69  ANGNLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPIEWKIEEKYRAKGRDKDE 128

Query: 117 FTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNG 176
               +FR +CR +A   VD QR++F RLGV G+W  PYLTMDF  E  I     K +  G
Sbjct: 129 IPVIDFRQECRTFAEGWVDVQREEFKRLGVTGNWEKPYLTMDFHAERVIAEEFMKFLMTG 188

Query: 177 HLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGP-- 234
            L++G+KPV W    ++ALAEAEVEY+D+ + +I V F        KA+   S V+ P  
Sbjct: 189 TLYQGSKPVMWSPVEKTALAEAEVEYHDRQTDAIWVKFPIT-----KARVGESPVDEPDD 243

Query: 235 ---------------ISLVIWTTTPWTLPANRAISIAPDFDYVLVQID----------GQ 269
                           +++IWTTTPWT+P NRAI       Y L +I           G 
Sbjct: 244 HMGAGAQLLAEQLEESAVIIWTTTPWTIPQNRAICFGEGISYGLYEITATPEECWASVGD 303

Query: 270 AVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMG---------FDVPAILG 320
             I+A  L E+ + +  V  +T    V   EL  +   HPF G         FDVP + G
Sbjct: 304 TYIMADALAEAALTQARVEGFTRRRDVTAGELSRVTCAHPFAGAEGAGGEWDFDVPLLAG 363

Query: 321 DHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFK-- 378
           DHVT DAGTG VHTAP HG DDY IG K+GL     V  D +Y     P   G  + K  
Sbjct: 364 DHVTDDAGTGFVHTAPSHGDDDYAIGVKHGLPMTYNVLDDSSYR-ADLPFFGGECILKPN 422

Query: 379 -----ANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQ------ 427
                AN  V+A L E   LL  +++  S    WR K P+I    PQWF ++D+      
Sbjct: 423 GKPGGANKAVIAKLVELDRLLARQRITISDAHSWRSKAPVIRLNRPQWFAAIDKPVGDGN 482

Query: 428 ----KGLRAQSLKEIKG-VQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDT 482
               + +R ++L  I   V W P  G+ R+ SM+  RPDW +SRQR WGVP++ FV K  
Sbjct: 483 DTYGETIRQRALTSIDQLVTWTPQTGRNRLYSMIEARPDWVLSRQRAWGVPLTCFVKKGA 542

Query: 483 EELHP----RTLELMEEVAKRVEVDGIQAWWDLDAK-EILGDEADQ--YVKVPDTLDVWF 535
           +   P    R   +   + +  E +G  +W+   AK   LG+E D   Y +V D LDVWF
Sbjct: 543 QPADPDYLLRDPAVNARIVEAFENEGADSWYAEGAKARFLGNEHDPEAYEQVFDILDVWF 602

Query: 536 DSGSTHSSVVDVRPEFAGHA-ADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGF 594
           DSGSTH+ V+  R + +    AD+YLEG+DQHRGWF SS++ +    G+APYR VLTHGF
Sbjct: 603 DSGSTHAFVLRDREDGSEDGLADLYLEGTDQHRGWFHSSMLQACGTMGRAPYRGVLTHGF 662

Query: 595 TVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRR 654
           T+D +G KMSKS+GNTV+P+ V+ + GADILRLWVA +DYT ++ + DEILK  ADSYRR
Sbjct: 663 TLDAKGNKMSKSVGNTVAPEKVVQQYGADILRLWVAQSDYTVDLRIGDEILKNVADSYRR 722

Query: 655 IRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQR 714
           +RNT R+LL  L+ F+ A D V PE+M  ++R  +       E +   Y AYDF  V Q 
Sbjct: 723 LRNTMRYLLGALSAFEEA-DRVAPEQMPEMERVILHMMADLDERVRAGYAAYDFQGVFQS 781

Query: 715 LMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEV 774
           +  F +V + + Y DI KD  Y  K DS+ RR+  T +  I   L  W+APIL FT +EV
Sbjct: 782 VFHFATVTLSAQYFDIRKDALYCDKPDSLRRRAALTVMDAIFHRLTAWLAPILVFTCEEV 841

Query: 775 W-GYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVG 833
           W    PG  +  +   ++          EA+    W+ +  VR  V   +E  R  K +G
Sbjct: 842 WLERFPGP-DSSIHLQDFPAPRPDWRHPEAVGR--WEVIRGVRRVVTGGLELERQAKTIG 898

Query: 834 GSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVAL 893
            SLEAA T++    +A  +    +      + S  TV+  +  P  A     + G+ +  
Sbjct: 899 ASLEAAPTVHVPAHVAGMIDP--ELFADTCIVSQLTVST-DPVPEGAFTLPDVPGVGMVF 955

Query: 894 SKAEGEKCPRCWHYTQDVGKVAEHAEICGRC 924
           ++AEGEKC RCW    DVG  A H   C RC
Sbjct: 956 ARAEGEKCQRCWKILPDVGTHA-HPGTCARC 985