Pairwise Alignments

Query, 254 a.a., pyruvate dehydrogenase complex transcriptional repressor PdhR from Escherichia coli ECOR38

Subject, 238 a.a., GntR domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  103 bits (257), Expect = 3e-27
 Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 6/237 (2%)

Query: 2   AYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAK 61
           A+   R+ +L + I  Q+  LI +G L+ G+KLPPER LA+ F VSR  +REAI+ LE +
Sbjct: 8   AFKPARRIRLHEEIVGQIRDLIEKGELKSGDKLPPERRLAELFGVSRHCVREAIRSLEQQ 67

Query: 62  GLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRSTD 121
            ++  R G GT+V     ++  +PL  ++        ++LE R  LE   A  AA   +D
Sbjct: 68  RIVTSRLGDGTYVLDDTEETLIEPLAAIIEQRRAKLREVLEFRRLLEPQIAALAAAHVSD 127

Query: 122 EDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNV 181
            D   +R    A ++A+  G  +  S+A +++ + +  A  N V+  +L  +  +L  + 
Sbjct: 128 GDLAALRRALDA-QIAEIGGG-NTGSDADVEFHMIIARATRNTVVQEVLTRLHDILTDS- 184

Query: 182 RQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSRE 238
            ++F L    R     V++H   I  A+ A  P+ A  A H H+  +EEI L+ S E
Sbjct: 185 -RDFTLQTEDRRQW-AVATH-ANILAAMEARDPQAAFRAMHEHILHVEEIALEWSGE 238