Pairwise Alignments

Query, 254 a.a., pyruvate dehydrogenase complex transcriptional repressor PdhR from Escherichia coli ECOR38

Subject, 260 a.a., GntR domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  126 bits (317), Expect = 4e-34
 Identities = 80/244 (32%), Positives = 128/244 (52%), Gaps = 2/244 (0%)

Query: 3   YSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKG 62
           +  I    ++D +  Q+E LI+   LR G +LP ER+LA+   VSRP LREA++RLE +G
Sbjct: 8   FQPIDHDSVADAVVTQIEDLIVSRVLRQGARLPAERDLAEALGVSRPKLREALKRLEDEG 67

Query: 63  LLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRSTDE 122
           LL  R+G G+FV      + S  L++L S H E+ ++ LE R   E  AA  AA R TD 
Sbjct: 68  LLETRKGEGSFVAQLTNTAMSPALLDLFSRHGEAFFEYLEYRKEQEAFAARLAAERHTDF 127

Query: 123 DKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVR 182
           D + I +    + +AQ   D  A   + + +  A+ +A+HN +L H++  +  +  + V 
Sbjct: 128 DAQAISQHLANMRIAQDRDDARASMESDIAFHSAIVDASHNTMLSHMMSSIYELTRRGVF 187

Query: 183 QNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREESRR 242
            N + L +      ++ +    I  AI+A  P+ A  A+  H+ F+      R  EE +R
Sbjct: 188 YNRDYLRAIDGTGEMLLAQHEAIGAAILARDPDAAEAAARAHIDFVGASF--RKGEEQQR 245

Query: 243 ERSL 246
             +L
Sbjct: 246 REAL 249