Pairwise Alignments

Query, 890 a.a., bifunctional uridylyltransferase/uridylyl-removing protein GlnD from Escherichia coli ECOR38

Subject, 936 a.a., GlnB (protein PII) uridylyltransferase, GlnD (NCBI) from Rhodospirillum rubrum S1H

 Score =  405 bits (1040), Expect = e-117
 Identities = 271/808 (33%), Positives = 402/808 (49%), Gaps = 60/808 (7%)

Query: 87  LALVAVGGYGRGELHPLSDVDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLE 146
           + ++AVGGYGRGE+ P SDVDLL L   K      Q V  +L  LWD+ L+VGH+ R++E
Sbjct: 103 MTVLAVGGYGRGEMSPQSDVDLLFLLPYKATPLHEQVVEYMLYTLWDMGLKVGHATRSIE 162

Query: 147 ECMLEGLSDLTVATNLIESRLLIGDVALFLELQKHIFS---EGFWPSDKFYAAKVEEQNQ 203
           EC+ +   DLT+ T ++E+R L GD AL+ +L+   ++    G  P   F  AK+ E+++
Sbjct: 163 ECIRQARGDLTIRTAMLETRYLWGDRALYGQLKTKFWTGVVTGTGPD--FVEAKLAERDE 220

Query: 204 RHQRYHGTSYNLEPDIKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELN 263
           RH R   + Y LEP+IK   GGLRD+HTL W+AR  +G + + E+V  G L++    +  
Sbjct: 221 RHLRMGDSRYVLEPNIKDGKGGLRDLHTLLWIARYIYGVSDMRELVELGVLSADAATKFG 280

Query: 264 ECLHILWRIRFALHLVVSRYDNRLLFDRQLSVAQRLNYSGEGN-EPVERMMKDYFRVTRR 322
                LW +R  LH +  R + RL FD Q ++A R+ Y+   +   VER MK YF + + 
Sbjct: 281 RARAFLWTVRCHLHYLADRPEERLTFDVQPAIAARMGYTDRNSGRGVERFMKHYFLMAKT 340

Query: 323 VSELNQMLLQLFDEAILALPADEKPRPIDD------------EFQLRGTLIDLRDETLFM 370
           V +L ++   + ++        +K RPI              +F L G  + +     F 
Sbjct: 341 VGDLTRIFCAVLED-------QQKRRPILSIATLLMRKRNLGDFVLDGGRLAVAGRGAFR 393

Query: 371 RQPEAILRMFYTMVRNSAITGIYSTTLRQLRHARRHLQQP--LCNIPEARKLFLSILRHP 428
             P  ++ +F   V +     I+  TLR +     HL     L N  +A  LF+ IL   
Sbjct: 394 EHPLQLISLF--KVAHDHGLDIHPDTLRLVTE---HLPTVTLLRNDAKANALFMEILTSR 448

Query: 429 GAVRRGLLPMHRHSVLGAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETR 488
                 L  +    VL  ++P +  +  QMQFD++H YT DEHTIR +  L    +   R
Sbjct: 449 KDPELALRQLSESGVLARFIPDFGRVTAQMQFDMYHVYTTDEHTIRAIGLLHRLETGALR 508

Query: 489 QRHPLCVDVWPRLPSTELIFIAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQL 548
            R P   D   ++ S   +++A L HDIAKGRGGDHSILGA+  +      G++  ET+ 
Sbjct: 509 DRMPAAADAVHKVQSRRALYLAVLLHDIAKGRGGDHSILGAEVAMRLGPRLGMSEEETET 568

Query: 549 VAWLVRQHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNS 608
           VAWLVR HL MS TA +RD+ D + I  F   VQ+  RL  L+ LT  DI A    +WN+
Sbjct: 569 VAWLVRHHLDMSRTAFKRDLDDIKTILDFTGLVQSVERLHLLLALTTVDILAVGPAVWNN 628

Query: 609 WKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRC- 667
           WK SLLRELY  ++  L  G Q   + R++   H+ + LA    D          W +  
Sbjct: 629 WKSSLLRELYTHSKDVLTSGFQ--AEARDKRVAHKREELAAALAD----------WPQAS 676

Query: 668 RANYFVRHSPN-----QLAWHARH--LLQHDLSKPL---VLLSPQATRGGTEIFIWSPDR 717
           R  Y   H P        A H RH  +L+      L   V + P   R  +E+ + + D 
Sbjct: 677 RERYLDLHYPAYWLTFDSATHLRHARMLRRARDAGLTVAVEVLPDPERAVSEVLVATDDH 736

Query: 718 PYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRH-----EVIRF 772
           P LF+ +   +    +++ DA+I T  DG A+D F V   +G  +  +       + +R 
Sbjct: 737 PGLFSKIAGAMALAGVNILDAKITTMSDGGALDIFTVQTLEGHAIEKEERIARLAKTVRD 796

Query: 773 GLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSFLELIALDQPGLLARVG 832
            L   L        QP R P + RH TV   V      +   + +E+   D+PG L  V 
Sbjct: 797 VLTGDLPLEKALRRQPPRLPERTRHLTVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVT 856

Query: 833 KIFADLGISLHGARITTIGERVEDLFII 860
           +   D+ + +  AR++T GERV D F +
Sbjct: 857 RALTDVAVQISSARVSTYGERVVDSFYV 884