Pairwise Alignments

Query, 318 a.a., sugar ABC transporter permease from Escherichia coli ECOR38

Subject, 349 a.a., permease from Sinorhizobium meliloti 1021

 Score =  157 bits (397), Expect = 4e-43
 Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 23/307 (7%)

Query: 17  LVLTVAAFSITMPEIFWSISNFQSVASQMPVLGILALAMAVTMLCGGINLSIIATANACS 76
           LVL +A  +      F ++ N  +VA Q   + ILA+     +L GGI+LS+ A A   +
Sbjct: 36  LVLLMAYLAFATSN-FLTLDNLSNVARQSAFVAILAVGQTFVILTGGIDLSVAAIAALSA 94

Query: 77  LVMAWVATQ-----------YPPGIATVVATLLAGAGAAVIIGLCNGVLIAGIRVSPILA 125
            + A + TQ            PP +A ++  L+  A  A+     NG LI+  ++   +A
Sbjct: 95  SITAVLLTQPLVLFGIDFGFVPPPVAILIGILIGMAAGAL-----NGWLISKFKIPDFIA 149

Query: 126 TLGMMTLLKGVNILVTGGSAIANY------PSWVLWLNHAQWFGIPLPMWLFTAVALGLW 179
           TLG MT  +G  +LVT G  + ++      P  ++W+   Q FG+P+   +    A   W
Sbjct: 150 TLGTMTAFRGAALLVTDGLPVPSFNAGRQLPESLIWVGGGQLFGVPVSALIALLCAAAGW 209

Query: 180 ILLEKTPLGKAIYLIGSNERATLYSGINTRRVLIWVYVISALLCAVAAFLMMSKLNSAKA 239
            +L  T LG+AIY +G N  A   SGI+  R  I  Y IS LL A+A  +++ +LNSA A
Sbjct: 210 YVLRYTALGRAIYAVGGNRAAAHSSGISISRTKIMTYAISGLLAAIAGIILVGRLNSANA 269

Query: 240 SYGESYLLVSILAAVLGGVNPDGGSGRIIGMVLALFLLQIIESGFNILGISPYLTMALWG 299
              +   L SI + V+GG N  GG G + G ++   ++ ++ +G N+L +SP+      G
Sbjct: 270 LMADGEELRSIASVVIGGTNLFGGEGGVWGSIIGAAIIGVLGNGLNLLDVSPFWQRIAQG 329

Query: 300 TLLLCFI 306
            +++  +
Sbjct: 330 VVIVVVV 336