Pairwise Alignments

Query, 299 a.a., (2E,6E)-farnesyl diphosphate synthase from Escherichia coli ECOR38

Subject, 293 a.a., polyprenyl synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  275 bits (703), Expect = 9e-79
 Identities = 147/262 (56%), Positives = 189/262 (72%), Gaps = 5/262 (1%)

Query: 36  MQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLR 95
           M++GAL+GGKR+RPFLVYA G M GV    LDA AAA+ECIHAYSLIHDDLPAMDDD LR
Sbjct: 35  MEHGALIGGKRIRPFLVYAVGEMLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALR 94

Query: 96  RGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMC 155
           RG PT H+ F EA AILAGDALQTLAF I+S  +  E+S   +++M+  LA ASG +GMC
Sbjct: 95  RGQPTVHIAFNEATAILAGDALQTLAFEIISQ-EGGELSASQQLAMVRALAKASGYSGMC 153

Query: 156 GGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESI 215
           GGQA+DL+A  + + L+ L+R+HR KTGALIR AV L  ++A     +A  +L  +A++I
Sbjct: 154 GGQAMDLNATDRQIDLETLKRLHRLKTGALIRCAVELPIIAAKVTDEQASHLL-TFADAI 212

Query: 216 GLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLK 275
           GLAFQVQDD+LD++  T  LGK QG+D +  KSTYP LLGL  A+  A+ LI+DA   L 
Sbjct: 213 GLAFQVQDDVLDIIASTEELGKPQGSDCESNKSTYPKLLGLSGAQATAKSLIEDA---LS 269

Query: 276 QLAEQSLDTSALEALADYIIQR 297
            LA+   ++  +   A +II+R
Sbjct: 270 ALAKLPYNSQLIAEFARFIIER 291