Pairwise Alignments

Query, 299 a.a., (2E,6E)-farnesyl diphosphate synthase from Escherichia coli ECOR38

Subject, 291 a.a., Polyprenyl synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  221 bits (563), Expect = 2e-62
 Identities = 134/262 (51%), Positives = 167/262 (63%), Gaps = 12/262 (4%)

Query: 40  ALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLP 99
           A  GGKRLR  LV  T  + GV+       AAA+EC+HAYSL+HDDLPAMDDDDLRRG P
Sbjct: 38  ATRGGKRLRGVLVLETAWLHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQP 97

Query: 100 TCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQA 159
           T HVK+ EA+AIL GDALQTLAF  LSD  M +      ++++  LA ASG AGM  GQA
Sbjct: 98  TVHVKWDEASAILVGDALQTLAFEALSDPRMTD-DPAVALALVRSLAQASGAAGMVLGQA 156

Query: 160 LDLDAEGKHVP--LDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPV-LDKYAESIG 216
           LD+ AE    P  LD + R+   KTGALIR +   GAL A     RA P  L +YAE+IG
Sbjct: 157 LDIAAETAAAPLSLDEITRLQAGKTGALIRWSAEAGALLA-----RADPAPLRRYAEAIG 211

Query: 217 LAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ 276
           LAFQ+ DDILDV GD    GKR   D + GK+T+ +LLGLE AR +A  L+ +A  +L+ 
Sbjct: 212 LAFQIADDILDVTGDAEKAGKRLQKDAEAGKATFVSLLGLEAARARAAALVAEAEAALQP 271

Query: 277 LAEQSLDTSALEALADYIIQRN 298
              ++     L  LA ++I R+
Sbjct: 272 YGAEA---ETLCELARFVIARD 290