Pairwise Alignments

Query, 299 a.a., (2E,6E)-farnesyl diphosphate synthase from Escherichia coli ECOR38

Subject, 293 a.a., farnesyl-diphosphate synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  273 bits (698), Expect = 3e-78
 Identities = 147/262 (56%), Positives = 184/262 (70%), Gaps = 5/262 (1%)

Query: 36  MQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLR 95
           M +GALLGGKR+RPFLVY+ G MFGV    LDA AAA+ECIHAYSLIHDDLPAMDDDDLR
Sbjct: 35  MTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDASAAAIECIHAYSLIHDDLPAMDDDDLR 94

Query: 96  RGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMC 155
           RG PT H+ F EA AILAGDALQTLAF I+++A +P +S    I+M+  LA ASG  GMC
Sbjct: 95  RGQPTVHIAFDEATAILAGDALQTLAFEIVTEA-VPGISSEQHIAMVRALAKASGYRGMC 153

Query: 156 GGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESI 215
           GGQA+DL +  K + L AL ++H  KTGALI  AV L AL A +  +     + ++A ++
Sbjct: 154 GGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVEL-ALIAANAPKDEYQTMMEFAHAV 212

Query: 216 GLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLK 275
           GLAFQVQDDILD++  T  LGK QG+D +  KST+P LLGL+ A+  A  LI +A   L 
Sbjct: 213 GLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAKDTAAQLIQEA---LS 269

Query: 276 QLAEQSLDTSALEALADYIIQR 297
            LA+   ++  +   A YII+R
Sbjct: 270 ALAKLPYNSQLIADFARYIIER 291