Pairwise Alignments

Query, 1120 a.a., mechanosensitive channel MscK from Escherichia coli ECOR38

Subject, 1060 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  405 bits (1040), Expect = e-116
 Identities = 307/1109 (27%), Positives = 544/1109 (49%), Gaps = 95/1109 (8%)

Query: 22   VFVLLCQNTAFARASSNGDLPTKADL--QAQLDSLNKQKDLSAQDKLVQQDLTDTLATLD 79
            + ++LC  +    A+S  +L  +  L  + Q+ S +  + LS    L+++ LT+  A   
Sbjct: 5    LLIILCLISFSGAANSPLNLNKRLGLGQEPQVASKSTAEQLS----LLEEQLTEQQALQS 60

Query: 80   KIDRVKEETVQLRQKVAEAPEKMRQATAALTALSDVDNDEETRKILSTLS-LRQLETRVA 138
              D +  +    +Q + +   ++++A   L    + D  ++       LS L++ E  +A
Sbjct: 61   SFDAIIHQYQSQKQALTQ---QLKEAATPLEYNPNQDLSQQASLSYLRLSELKETEANLA 117

Query: 139  QALDDLQNAQNDLASYNSQL-VSLQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALR 197
              +++L   Q  L S  SQ  ++L    +   N     S+  +++  +   T   E A  
Sbjct: 118  TQVNELIKRQQQLPSLISQANLTLAKHKQATSNDNQPLSEMQRRVYVQSLSTLESELASS 177

Query: 198  PSQKVLMQAQQALLNAEIDQQRKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAV 257
              Q  L Q Q AL+ +++ QQ   +E    L   + +QR   TA                
Sbjct: 178  QKQIALTQQQLALVRSQLVQQEALIER---LNGAIAEQRHKATA---------------- 218

Query: 258  NSKRLTLTEKTAQEAVSPDEAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIK 317
                 T+     + +++ D+A  I+ N         NQ   ++L   T     +M Q  +
Sbjct: 219  ----ATIAASQIETSIT-DDAIAIKLNAQ-------NQAYGEQLKQLTHEVTNVMTQQEQ 266

Query: 318  VKNWLERALQSERNIKEQIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQF 377
             +   +   +   NI++QIA++K +        +   +LP     + ++N IA+ RL ++
Sbjct: 267  AETQYQFQAKQITNIQQQIALVKLNSAFGERFLRILYSLPKPPSQDKISNEIANARLARY 326

Query: 378  EVNQQRDALFQSDAFVNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMA 437
            ++ Q +  L      V +L    +  V ++         +++R+LL+  +  LG      
Sbjct: 327  QIEQDQ-TLHPLLGAVEQLTPLQSKLVGAQK--------ELQRQLLENYDLYLGE----L 373

Query: 438  INLQINQQQLMSVSKNLKSILTQQIFWVNSNRPMDWDWIKAFPQS------------LKD 485
              L++  +QL    + LK+ L + +FWV +   +D  W+    QS            ++D
Sbjct: 374  AELRVLYEQLGQQYQTLKTTLNEHLFWVANANSIDGYWLGDLYQSTQWLLTQAPWHQVQD 433

Query: 486  EFKSMKITVNWEKAWPAVFIAFLAGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDS 545
                     +W   W  + +        L++  L+  +   L A   K  + VG++  D 
Sbjct: 434  SLSEQSTLWSW---WVILMVL------CLVMQDLVTPKFTQLMA---KNVTYVGNVTQDK 481

Query: 546  QLNTPKAILIDLIRALPVCLIILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKV 605
             + +   ++  L+ +    L +++ GLI      N+   +      + + + ++ L + +
Sbjct: 482  FIYSFNTLIGSLLYSCIKPLPLISGGLIFYFSNHNLVSSVGMGILAIGMLYQLYRLTYLL 541

Query: 606  LEKNGVAVRHFGMPEQQTSHWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIF 665
                G+ + HF   +      ++++  +++  +PI       E+    L+ + LG+    
Sbjct: 542  ALDKGLLIGHFKGDKAIIRAGQQRLRALTVLAMPIVGVIGFTEVLETSLVRNSLGRGAFI 601

Query: 666  FNLLLIAFLVWPMCRESWR-------DKESHTMRLVTITVLSIIPIALMVLTATGYFYTT 718
               L++ +    M   S +       DK    ++ +  ++L ++P A  VL   GY++T 
Sbjct: 602  LLALMLFWFYRDMLSLSKQEHHYHQDDKNKRLLQKLLWSILILLPPACAVLAFRGYYFTA 661

Query: 719  LRLSGRWIETVYLVIIWNLLYQTVLRGLSVAARRIAWRRALARRQNLV-----KEGAEGA 773
             ++  +   ++ L + + LLYQ + R + +  RRIA+ RA A+R  ++     ++     
Sbjct: 662  YQMLLQLQLSLILSLSFMLLYQLIKRWMLIERRRIAFNRAKAKRAEILAQREKEDDPNSN 721

Query: 774  EPP---EEPTIALEQVNQQTLRITMLLMFALFGVMFWAIWSDLIT-VFSYLDSITLWHYN 829
            EPP   EEP + LE ++ Q+L +   L+   F +    +W+   + +FS+LD ITLW  +
Sbjct: 722  EPPDTYEEPVVDLETISSQSLGLVRSLLTLAFLISLIGLWTQTHSAIFSFLDGITLWTSS 781

Query: 830  GTEAGAAVVKNVTMGSLLFAIIASMVAWALIRNLPGLLEVLVLSRLNMRQGASYAITTIL 889
             T  G A    +T+ SLL  +I    +  +  NLPGLLE+++L RL++ QG  +AITT+ 
Sbjct: 782  STVDGIAQQLPITLKSLLLGLIIVGFSLMIATNLPGLLELMILQRLDLTQGTGFAITTVS 841

Query: 890  NYIIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIG 949
             Y+++  G ++ F +LG+ W KLQWL AALSVGLGFGLQEIF NF+SGLIILFE+PVRIG
Sbjct: 842  RYLVVFFGMLSGFSTLGMEWSKLQWLVAALSVGLGFGLQEIFANFISGLIILFEKPVRIG 901

Query: 950  DTVTIGSFSGTVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGV 1009
            DTVTI   +GTVSKI+IRATTI D+DRKE+I+PNKAF+TE+LINWSL+D  TR+++ + V
Sbjct: 902  DTVTIRELTGTVSKIQIRATTIVDWDRKEIIVPNKAFITEQLINWSLSDPITRVIVYVSV 961

Query: 1010 AYGSDLEKVRKVLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVD 1069
            A  SD  +V   L +A  E    +  P PEV+F  FG  T D+E+R Y +++  R     
Sbjct: 962  ARDSDPARVEAALYQAVKECDDALTTPEPEVWFAGFGQHTQDYEIRAYAKDMNTRWPLRH 1021

Query: 1070 ELNRTIDQLCRENDINIAFNQLEVHLHNE 1098
            +L++ + +  REN + +A+ QLEVH+  +
Sbjct: 1022 KLHKQVSKKLRENHLELAYPQLEVHISGQ 1050