Pairwise Alignments

Query, 568 a.a., flagellin FliC from Escherichia coli ECOR38

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (354), Expect = 7e-38
 Identities = 77/184 (41%), Positives = 116/184 (63%), Gaps = 6/184 (3%)

Query: 5   INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQA 64
           +NTN  ++  Q  + K    L++S+ERLSSG RINSAKDDAAG  I+NR T+  +GL  A
Sbjct: 5   VNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVA 64

Query: 65  ARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEID 124
            RNANDGIS+AQT EGA++E  + LQR+R+L +Q++ GTNS S+  ++ +E  +  DE++
Sbjct: 65  MRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDELN 124

Query: 125 RVSGQTQFNGVNVL-AKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
           R++  T F G  +L    G    Q+G++ G+ I + L  + +D      F + G+  IA 
Sbjct: 125 RIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRAD-----DFRMGGQSFIAE 179

Query: 184 KAAT 187
           +  T
Sbjct: 180 QPKT 183



 Score = 87.4 bits (215), Expect = 9e-22
 Identities = 42/99 (42%), Positives = 69/99 (69%), Gaps = 1/99 (1%)

Query: 469 ETTSAGTATKDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQD 528
           + TS G  +++ +  +D A+  +D  R+ LGA QNRL  +++NL+N   N+  ++SRI+D
Sbjct: 282 DITSVG-GSQNAVGIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKD 340

Query: 529 ADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 567
            D+A E + ++K+QI+QQAG S+LA+A Q+P   +SLLQ
Sbjct: 341 TDFAKETTQLTKSQILQQAGTSILAQAKQLPNSAISLLQ 379