Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein FliF from Escherichia coli ECOR38

Subject, 539 a.a., flagellar M-ring protein FliF (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  249 bits (637), Expect = 1e-70
 Identities = 173/551 (31%), Positives = 279/551 (50%), Gaps = 41/551 (7%)

Query: 9   KSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLT 68
           K+  +  R+  + +I +     A VAV   L+ W   PDYR L+SNLS +D   +V  L 
Sbjct: 11  KAKGFWERISISQRIFIAGLAVAVVAVFFGLVFWMNRPDYRVLYSNLSPEDASRVVKLLQ 70

Query: 69  QMNIPYRFSEASGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQVN 128
              + Y+      +I VPADKV++LRL++A +G   G  +GFE+ DQ K G + F +++N
Sbjct: 71  ADKVAYKLESGGSSITVPADKVYDLRLKVAGEGNLVGQGIGFEIFDQVKVGQTDFVQKIN 130

Query: 129 YQRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLL-PGRALDEGQ 187
           YQRAL+GELSRTI     V+ ARVHL +P  SLF+ EQ+ PS SV + L    + L+   
Sbjct: 131 YQRALQGELSRTISEFPNVESARVHLVIPHRSLFIEEQQKPSVSVVLKLRDSSKKLESKD 190

Query: 188 ISAIVHLVSSAVAGLPPGNVTLVDQGGHLLTQSNTSG--RDLNDAQLKYASDVEGRIQRR 245
           + AIV+LV  AV GL    V++ D  G +L   +  G    +   QL +   ++  ++RR
Sbjct: 191 VQAIVNLVVMAVEGLDKYKVSIADTTGKILYAPDEDGSITGMTTTQLDHKLRMQQTLERR 250

Query: 246 IEAILSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGY 305
           IE +L P++G G I A+V A LDF+ +   +E Y    D     +RS Q +E  Q G   
Sbjct: 251 IEELLYPVLGAGKIIAKVNADLDFSQRTIRKELY----DPEKTVVRSEQRSEESQRG--- 303

Query: 306 PGGVPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRSTQRNETSNYEVDRTIR 365
                          +N    +P AN          ++  G R T+   T+NYE+++  +
Sbjct: 304 --------------RSNLEAGSPDANFRGDSPTGGASTQEGNRETR---TTNYEINKEEQ 346

Query: 366 HTKMNVGDVQRLSVAVVVN--YKTLPDGK--PLPLSNEQMKQIEALTREAMGFSEKRGDS 421
           +    VGD+ RL+VAV+V+  Y+   DG+   +P   E +++I  L   A+G+   RGD+
Sbjct: 347 NIVAQVGDISRLTVAVIVDGTYEKGADGQWAFVPRKAEDVERIRQLVANAVGYDRARGDT 406

Query: 422 LNVVNSPFNSSD-ESGGALPFWQQQVFIDELLAAGRWLLVLLVAWLLWRKAVRPQLTR-- 478
           + V +  F   D     +LP    Q+ +D  L  G+ LL  L+ +L     VRP +    
Sbjct: 407 IEVSSISFGGPDVPQESSLP----QLVMDYALRLGKPLLNALLVFLFLVLVVRPVVLAMI 462

Query: 479 RAEAVKTVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRV 538
           R      + +  +   E E+ + + +  DE++    A +++  E +     +M++ +   
Sbjct: 463 RPRVEGEMIEGLEGLPEGEERLAL-IEGDEEVDALDALKKI--EDIKAHALQMAEQNMDQ 519

Query: 539 VALVIRQWINN 549
              +IR W+ +
Sbjct: 520 AVSIIRSWLKH 530