Pairwise Alignments

Query, 331 a.a., flagellar motor switch protein FliG from Escherichia coli ECOR38

Subject, 355 a.a., Flagellar motor switch protein from Pseudomonas stutzeri RCH2

 Score =  145 bits (366), Expect = 1e-39
 Identities = 90/323 (27%), Positives = 178/323 (55%), Gaps = 2/323 (0%)

Query: 1   MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFE 60
           + +++  D++ IL++++G++ +A + ++ S+ E+ ++S AMA ++ +    ++DV++ F 
Sbjct: 26  LRSVSSLDQAAILMLSMGDEISAGILRNFSREEIISISQAMARLSNVKQPMVSDVISRFF 85

Query: 61  QEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAAD 120
            + ++ +++   +  YL  +L KALG +   SLL+ I      A  +  + +++P+  A 
Sbjct: 86  DDYKEQSSIKGASRSYLAGMLGKALGGDITRSLLDSIYGEEIRAK-MAKMEWLDPKQFAA 144

Query: 121 LIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLN 180
           LI  EH Q+ A  L  L    A ++L       + +++ RIA    V    +AEL ++++
Sbjct: 145 LIAKEHAQMQAVFLAFLPPGMATEVLECMPAERQDELLYRIANLSEVNSDVIAELEQLID 204

Query: 181 GLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLV 240
             L   + + S++ GV+ AA+I+N  K  +++ +   +R  + EL  KI DEM+ F  L 
Sbjct: 205 RSLKVLSTQGSQVRGVKQAADIMNRFKGNRDQ-MFELLRAHNEELVGKIEDEMYDFFILS 263

Query: 241 DVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQ 300
             +   +Q LL+ +  +  ++ALKGAE  L +     M +R A  +      +GPV LS+
Sbjct: 264 RQNQDVLQTLLEVIPLDEWVVALKGAEPELVKAIQGAMPKRQAQQMESINRRQGPVPLSR 323

Query: 301 VENEQKAILLIVRRLAETGEMVI 323
           VE  +K I+ +VR ++  GE+ +
Sbjct: 324 VEQVRKDIMAVVREMSADGELQV 346