Pairwise Alignments

Query, 554 a.a., glutamine--tRNA ligase from Escherichia coli ECOR38

Subject, 556 a.a., glutaminyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  822 bits (2123), Expect = 0.0
 Identities = 399/551 (72%), Positives = 458/551 (83%), Gaps = 4/551 (0%)

Query: 3   EAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQC 62
           + E RP+NFIR IIDEDL SGKHT V TRFPPEPNGYLHIGHAKSICLNFGIA+DY+G C
Sbjct: 5   DTEVRPSNFIRNIIDEDLKSGKHTNVQTRFPPEPNGYLHIGHAKSICLNFGIARDYQGLC 64

Query: 63  NLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYV 122
           NLRFDDTNP KEDI+YV SI+ DV WLGF W G VRYSS+YFDQLH YA+ELINKGLAYV
Sbjct: 65  NLRFDDTNPEKEDIDYVNSIQADVRWLGFQWDGEVRYSSNYFDQLHQYAVELINKGLAYV 124

Query: 123 DELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASP 182
             L  ++ REYRGTL +PGKNSPYRD  VEENL LF KMR G F+EG+  LRAKIDMASP
Sbjct: 125 CFLNADETREYRGTLKEPGKNSPYRDTPVEENLRLFGKMRLGEFKEGECALRAKIDMASP 184

Query: 183 FIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYD 242
           F+ MRDPV+YRI+FA HHQTG+KWCIYPMYDFTHCISDALE ITHSLCTLEFQDNRRLYD
Sbjct: 185 FMCMRDPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEHITHSLCTLEFQDNRRLYD 244

Query: 243 WVLDNI---TIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRR 299
           WVLDN+     P   RQYEFSRLNLEYT+MSKRKLN LVT K V GWDDPRMPTI+GLRR
Sbjct: 245 WVLDNLDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVTRKLVTGWDDPRMPTIAGLRR 304

Query: 300 RGYTVASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENY-Q 358
           RGYT ASIREFC+RIG+TKQ+N IE A L++CIRE+LNE+APRAMAV+ P+K+VIENY +
Sbjct: 305 RGYTPASIREFCQRIGITKQENMIEAAMLDACIREELNEHAPRAMAVLRPLKVVIENYPE 364

Query: 359 GEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVI 418
           G+ E +   +HP+   MG+R++ F  EI+ID ADFREEANKQYKRLV+GKEVRLRNAYVI
Sbjct: 365 GQIETIQAASHPSDESMGTRELAFGREIFIDVADFREEANKQYKRLVMGKEVRLRNAYVI 424

Query: 419 KAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPIEIRLYDRLFS 478
           KAER +KD+EGNITT++C+YDADTL K+PADGRKVKGVIHWV A  A P + RLY RLF+
Sbjct: 425 KAERCDKDSEGNITTVYCSYDADTLGKNPADGRKVKGVIHWVEATTAKPAQFRLYQRLFT 484

Query: 479 VPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
            PNP AA+    V+NP SL +  G  E SL +A A KA+QFEREGYFC D++ S+A+  V
Sbjct: 485 DPNPAAAETVDEVLNPNSLEVVNGLVEASLANAPAEKAYQFEREGYFCADNKDSSADHLV 544

Query: 539 FNRTVGLRDTW 549
           FN TV LRD++
Sbjct: 545 FNLTVALRDSF 555