Pairwise Alignments

Query, 554 a.a., glutamine--tRNA ligase from Escherichia coli ECOR38

Subject, 579 a.a., glutaminyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  578 bits (1491), Expect = e-169
 Identities = 300/571 (52%), Positives = 381/571 (66%), Gaps = 23/571 (4%)

Query: 5   EARPTNFIRQIIDEDLASGKHT-TVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCN 63
           + +  NFI Q +++DL  GK+   V TRFPPEPNGYLHIGHAK+ICL+FGIA  + G CN
Sbjct: 11  DKKSLNFIEQAVEKDLKEGKNGGKVQTRFPPEPNGYLHIGHAKAICLDFGIAAKHGGVCN 70

Query: 64  LRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVD 123
           LRFDDTNP KED+EYVE+IK D++WLG+ W GN  Y+SDYF QL  +AI LI +G AY+D
Sbjct: 71  LRFDDTNPTKEDVEYVEAIKEDIQWLGYQW-GNEYYASDYFQQLWDFAIRLIEEGKAYID 129

Query: 124 ELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPF 183
           E T EQI + +GT TQ G NSPYRDR +EE+L LF+KM +G  EEG   LRAKIDM++P 
Sbjct: 130 EQTAEQIAQQKGTPTQAGVNSPYRDRPIEESLELFKKMNSGEIEEGAMVLRAKIDMSNPN 189

Query: 184 IVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDW 243
           +  RDP++YR+    HH+TG  W  YPMYDF H  SD  EG+THSLCTLEF  +R LYD 
Sbjct: 190 MHFRDPIIYRVVKHPHHRTGTTWKAYPMYDFAHGQSDFFEGVTHSLCTLEFVVHRPLYDL 249

Query: 244 VLDNI-----TIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLR 298
            +D +          PRQ EF++LNL YT+MSKR L  LV +  V GWDDPRMPTI G R
Sbjct: 250 FIDWLKEGKDLNDNRPRQTEFNKLNLSYTLMSKRNLLTLVKEGLVNGWDDPRMPTICGFR 309

Query: 299 RRGYTVASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENY- 357
           RRGY+  SI +F  +IG T  D   ++A LES +R+DLN  A R  AVI+PVKL+I NY 
Sbjct: 310 RRGYSPESIHKFIDKIGYTTYDALNDIALLESSVRDDLNSRATRISAVINPVKLIITNYP 369

Query: 358 QGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYV 417
           +G+ E +   N+P  PE GS  + FS E+W++R DF E+A K+Y R+  G+EVRL+NAY+
Sbjct: 370 EGQVEQLEAINNPEDPEAGSHMIEFSRELWMEREDFMEDAPKKYFRMTPGQEVRLKNAYI 429

Query: 418 IKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPIEIRLYDRLF 477
           +K    +KD  G IT ++C YDA+T S  P   RKVKG +HWVS  H L  E+RLYDRL+
Sbjct: 430 VKCTGCKKDENGVITEVYCEYDANTRSGMPDANRKVKGTLHWVSCNHCLQAEVRLYDRLW 489

Query: 478 SVPNP-------------GAADDFLSVINPESL-VIKQGFAEPSLKDAVAGKAFQFEREG 523
            V NP              A +    +INP+SL V+   + E            QF+R G
Sbjct: 490 KVENPRDELAAIREAKKCEALEAMKEIINPDSLKVLPNCYIEKFAATLPVLSYLQFQRIG 549

Query: 524 YFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE 554
           YF +D + ST EK VFNRTVGL+DTW K+ +
Sbjct: 550 YFNID-KDSTPEKLVFNRTVGLKDTWGKINK 579