Pairwise Alignments

Query, 209 a.a., Uncharacterized protein YbdM from Escherichia coli ECOR27

Subject, 170 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  143 bits (361), Expect = 2e-39
 Identities = 76/161 (47%), Positives = 107/161 (66%), Gaps = 1/161 (0%)

Query: 46  PVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDK-NAMEIVDG 104
           PV  V  V   ++  N YNPN  APPE +LL+ SI  DG+T P V  + +K +  E+VDG
Sbjct: 8   PVYGVKAVPVERIRANSYNPNVTAPPEMRLLELSIWEDGYTMPCVCYYIEKEDVYELVDG 67

Query: 105 FHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELS 164
           +HR+++   S  +  R  G LPVT +     +R+A+TIRHNRARG H+I  M+ +V EL+
Sbjct: 68  YHRYKVMMTSPRIYKRENGLLPVTVIRKDLAERMASTIRHNRARGMHKIELMTRLVGELT 127

Query: 165 QLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRA 205
           + G  D+ I + LGMD DE+LRLKQI+GL ELFAD+++ +A
Sbjct: 128 RSGMSDSWIRRNLGMDKDELLRLKQISGLAELFADKEFRKA 168