Pairwise Alignments

Query, 554 a.a., glutamine--tRNA ligase from Escherichia coli ECOR27

Subject, 556 a.a., glutaminyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  830 bits (2144), Expect = 0.0
 Identities = 400/550 (72%), Positives = 456/550 (82%), Gaps = 4/550 (0%)

Query: 3   EAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQC 62
           + E RP+NFIR IIDEDL SGKHT VHTRFPPEPNGYLHIGHAKSICLNFG+AQDYKG C
Sbjct: 5   DTEVRPSNFIRNIIDEDLESGKHTRVHTRFPPEPNGYLHIGHAKSICLNFGLAQDYKGLC 64

Query: 63  NLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYV 122
           NLRFDDTNP KEDI+YV SI+ DV WLGF W G +RYSS+YFDQLH YA+ELINKGLAYV
Sbjct: 65  NLRFDDTNPEKEDIDYVNSIQADVHWLGFQWDGEIRYSSNYFDQLHQYAVELINKGLAYV 124

Query: 123 DELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASP 182
             L  EQ REYRGTL +PGKNSPYRD  VEENL LFEKMR G F+EG+  LRAKIDMASP
Sbjct: 125 CFLNGEQTREYRGTLKEPGKNSPYRDTFVEENLELFEKMRKGEFKEGECALRAKIDMASP 184

Query: 183 FIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYD 242
           F+ MRDPV+YRI+FA HHQTG+KWCIYPMYDFTHCISDALE ITHSLCTLEFQDNRRLYD
Sbjct: 185 FMCMRDPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEDITHSLCTLEFQDNRRLYD 244

Query: 243 WVLDNI---TIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRR 299
           WVLDN+     P   RQYEFSRLNLEYT+MSKRKLN LV    V GWDDPRMPTI+GLRR
Sbjct: 245 WVLDNLDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVVRGLVSGWDDPRMPTIAGLRR 304

Query: 300 RGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENY-Q 358
           RGYT A+IREFC+RIGVTKQ+N +E++ L++CIRE+LNE+APRAMAVI+PVK++IENY +
Sbjct: 305 RGYTPAAIREFCRRIGVTKQENMVEVSMLDACIREELNEHAPRAMAVINPVKVIIENYPE 364

Query: 359 GEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVI 418
           G+ E ++ P HP    MG R++ F  E++ID  DFREEANK+YKRL+ GKEVRLRNAYVI
Sbjct: 365 GQVEKLSAPAHPTIESMGERELVFGRELYIDADDFREEANKKYKRLIQGKEVRLRNAYVI 424

Query: 419 KAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFS 478
           KAER +KD  GN+TTI+CTYD  TL K+PADGRKVKGVIHWV A  A+P E RLYDRLF+
Sbjct: 425 KAERCDKDEAGNVTTIYCTYDDQTLGKNPADGRKVKGVIHWVEATSAVPAEFRLYDRLFN 484

Query: 479 VPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPV 538
            PNP AA+    V+NP+SLV+K G  EP L +A A KA+QFEREGYFC DS+ S+ E  V
Sbjct: 485 QPNPAAAETVDEVLNPKSLVVKHGLVEPGLVNAEAEKAYQFEREGYFCADSKDSSPEHLV 544

Query: 539 FNRTVGLRDT 548
           FN TV LRD+
Sbjct: 545 FNLTVALRDS 554