Pairwise Alignments

Query, 319 a.a., aliphatic sulfonate ABC transporter substrate-binding protein SsuA from Escherichia coli ECOR27

Subject, 321 a.a., ABC transporter, substrate-binding protein, aliphatic sulfonates family from Pseudomonas stutzeri RCH2

 Score =  263 bits (672), Expect = 4e-75
 Identities = 141/307 (45%), Positives = 191/307 (62%), Gaps = 4/307 (1%)

Query: 5   IKLALVGLLSVSTIAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQS--KISWVE 62
           ++  LV LL+ +    A     E LRIGYQK    +VL K+   LE+R       + W E
Sbjct: 6   LRRGLVALLAATLSIGAFHVQAETLRIGYQKYGT-LVLLKARGTLEQRLAGQGFAVQWTE 64

Query: 63  FPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIK 122
           FP GPQ+LE LNVGSID G TG+ PP+FAQAAGADL+YV  EPP P  E ILV E+SPI+
Sbjct: 65  FPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAHEPPAPSGEAILVPEDSPIR 124

Query: 123 TVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAI 182
           ++ +L G K+A  KGS+ H LL+RAL  AGL+++DIQP YL PADARAAF++G+VDAW I
Sbjct: 125 SLTELNGKKIALNKGSNVHYLLVRALESAGLQYSDIQPVYLPPADARAAFERGSVDAWVI 184

Query: 183 WDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRS 242
           WDP+ +AA  Q   R L+DG  L     FYLAARP+A++N A I  ++    +      +
Sbjct: 185 WDPFQAAAEEQLQARTLRDGQGLVSNHQFYLAARPFADRNPAVISTLIGEIRDIGRWVEA 244

Query: 243 QREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKV 302
             +Q+   +A  +GL   +    +  R     +P+  EV   QQ+ AD F E RL+P+K+
Sbjct: 245 NPDQATKQVAPLLGLSREITRKAV-IRQGYGARPITPEVVRAQQRIADTFAELRLIPRKL 303

Query: 303 DIRQRIW 309
            I+  +W
Sbjct: 304 VIQDAVW 310