Pairwise Alignments

Query, 173 a.a., 23S rRNA accumulation protein YceD from Escherichia coli ECOR27

Subject, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

 Score =  175 bits (443), Expect = 4e-49
 Identities = 85/174 (48%), Positives = 116/174 (66%), Gaps = 2/174 (1%)

Query: 1   MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV 60
           MQKVK+P T+DP + AQKRLD+ GI   +  +R+ ESV  V  D E S+SF ID Q+L V
Sbjct: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60

Query: 61  LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL 120
           ++G A + V LECQRC + F H+    + ++P    +  E  P+ Y+ +++NEFGE+DL+
Sbjct: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120

Query: 121 AMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEA--QKPNPFAVLASLKR 172
            +VEDE IL LP V +HD   C V   ++VFGELPEE   +KPNPF VL SLK+
Sbjct: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLKK 174