Pairwise Alignments

Query, 173 a.a., 23S rRNA accumulation protein YceD from Escherichia coli ECOR27

Subject, 174 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (389), Expect = 8e-43
 Identities = 76/174 (43%), Positives = 110/174 (63%), Gaps = 1/174 (0%)

Query: 1   MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV 60
           MQ VK+P+++DP+R A  RL YQGI     ++R+ E      SDV  S+   +D Q +  
Sbjct: 1   MQTVKIPVSIDPIRAASNRLSYQGIVPGKVLKRLRELTAGDCSDVTVSLECGVDLQGIVY 60

Query: 61  LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL 120
           L G A   +TL CQRC   +T +V   +CFSP R++ + + LP+AY+PIE +E GEI L 
Sbjct: 61  LKGTAVTELTLLCQRCMALYTTEVTVDFCFSPCRTEAEIDELPDAYDPIECDEIGEIRLQ 120

Query: 121 AMVEDEIILALPVVPVHDSEHCEVSEADMVFGEL-PEEAQKPNPFAVLASLKRK 173
            +VEDE+ILA+P++P H +  C +   D+V GE+   + ++PNPFAVL  LK K
Sbjct: 121 QLVEDELILAMPLIPAHQNIDCNLGSQDIVVGEIEAAQEERPNPFAVLEKLKSK 174