Pairwise Alignments

Query, 173 a.a., 23S rRNA accumulation protein YceD from Escherichia coli ECOR27

Subject, 174 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  154 bits (388), Expect = 1e-42
 Identities = 74/174 (42%), Positives = 107/174 (61%), Gaps = 1/174 (0%)

Query: 1   MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV 60
           MQ VK+P+++DP R A  R  Y+GI    Q+ R+ E      SDV  S+   +D Q +  
Sbjct: 1   MQTVKIPVSIDPFRAASSRSTYEGIVPGQQLRRLNELCAGDCSDVAVSIECGVDLQGIVY 60

Query: 61  LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL 120
           L G A   +TL CQRC   FT +V   +CF P R+  + + LP+AY+PIE NE GE+ L 
Sbjct: 61  LKGKAVTELTLVCQRCMTLFTTEVTVEFCFGPCRTKAEIDELPDAYDPIECNEIGEVRLH 120

Query: 121 AMVEDEIILALPVVPVHDSEHCEVSEADMVFGEL-PEEAQKPNPFAVLASLKRK 173
            ++EDE+I+A+P++P+H+   C     D+V GE+ P + ++PNPFAVL  LK K
Sbjct: 121 QLIEDELIVAMPIIPMHEETDCNTGSMDIVVGEIEPAQEERPNPFAVLEKLKSK 174