Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Escherichia coli ECOR27

Subject, 269 a.a., exonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  365 bits (938), Expect = e-106
 Identities = 166/268 (61%), Positives = 210/268 (78%), Gaps = 1/268 (0%)

Query: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60
           MK VSFNINGLRAR HQL+A+++ H PD+IGLQETKVHD+ FPL EV  +GY V YHG K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGN-VTVINGYFPQGESRDHP 119
            HYGVA+L+K  P+ V++GFP DD+EAQRR+IM       G  +TV+NGYFPQGE+  H 
Sbjct: 61  AHYGVAMLSKLPPVKVQKGFPTDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENISHE 120

Query: 120 IKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSF 179
            K+PAK +FYQ+L +YL+     D  + I+GD+NISP DLDIGIGE N KRWL+TGKCSF
Sbjct: 121 TKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSF 180

Query: 180 LPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAE 239
            PEEREW+  L+ WGLVDTFR  +P  ++R+SWFDYRSKGFDDNRGLRID++LA+  LAE
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPTRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAE 240

Query: 240 CCVETGIDYEIRSMEKPSDHAPVWATFR 267
              E+ +DY++R ++KPSDHAP+W+ F+
Sbjct: 241 RLTESDVDYDLRGIDKPSDHAPIWSCFK 268