Pairwise Alignments

Query, 336 a.a., Holliday junction branch migration DNA helicase RuvB from Escherichia coli ECOR27

Subject, 337 a.a., Holliday junction DNA helicase B (RefSeq) from Shewanella loihica PV-4

 Score =  509 bits (1312), Expect = e-149
 Identities = 256/337 (75%), Positives = 296/337 (87%), Gaps = 3/337 (0%)

Query: 1   MIEADRLISA---GTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDH 57
           MIEADRL+ A   GT   ++  DRA+RPKLL+EY GQ   R+Q+++FI+AA+ RG+ALDH
Sbjct: 1   MIEADRLVHAQPQGTEERDEQIDRAMRPKLLDEYTGQDDTRAQLKVFIEAAQKRGEALDH 60

Query: 58  LLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHR 117
           +LI+GPPGLGKTTLA IVANEMGVN+++TSGPVLEKAGDLAA+LTNLE  DVLFIDEIHR
Sbjct: 61  MLIYGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHR 120

Query: 118 LSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGI 177
           LSPVVEE+LYPAMEDYQLDIMIGEGPAARSIK++LPPFTLIGATTRAG+LTSPLR RFGI
Sbjct: 121 LSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLIGATTRAGALTSPLRARFGI 180

Query: 178 VQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVK 237
             RLEFY V DL  IV+RSA+ + L +  +GA+EVARR+RGTPRIANRLLRRVRD+AEVK
Sbjct: 181 PLRLEFYNVKDLSSIVTRSAKVLELPIDQEGAVEVARRSRGTPRIANRLLRRVRDYAEVK 240

Query: 238 HDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETI 297
           HDG ++  +A  ALDML+VD EGFDYMDRKLLLA+IDKF GGPVGLDNLAAAIGEERETI
Sbjct: 241 HDGEVNKVVAESALDMLDVDVEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETI 300

Query: 298 EDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE 334
           EDVLEP+LIQQGF+QRTPRGR+AT RA+ HF +  PE
Sbjct: 301 EDVLEPFLIQQGFIQRTPRGRIATARAYQHFNLIQPE 337