Pairwise Alignments

Query, 308 a.a., flagellar motor protein MotB from Escherichia coli ECOR27

Subject, 325 a.a., motility protein MotB from Ralstonia solanacearum IBSBF1503

 Score =  245 bits (625), Expect = 1e-69
 Identities = 133/277 (48%), Positives = 177/277 (63%), Gaps = 7/277 (2%)

Query: 2   KNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEY 61
           K+     IV++R K   HG   G+WKIAYADF+TAMMAFFL+MWL+S  +  EL  +  Y
Sbjct: 3   KSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETY 62

Query: 62  FRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKR-----MEQSRLR 116
           FRTPL  A+ GG   S  +S I  G     Q+  + N  P+    ++R      + + L 
Sbjct: 63  FRTPLKVALFGGAG-SGDQSSILQGSPAIKQNMPQPNPSPSPTVQRQRNIRDESDDAALN 121

Query: 117 KLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDIL 176
           KL+  + ++IES+P +   +  L ID+  EGLRIQI+D QNRPMF   SA+V+PYMR IL
Sbjct: 122 KLKQHIMEMIESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRTIL 181

Query: 177 RAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVL 236
           R +   LN +PN ISLSGHTD   YA+ + GYSNWELSADRANASRREL+ GG+   KV 
Sbjct: 182 RELGAALNDVPNPISLSGHTDATQYAT-QNGYSNWELSADRANASRRELIAGGMKPEKVA 240

Query: 237 RVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAI 273
           RVVG+ A++ L      + +NRRIS++VLN +   A+
Sbjct: 241 RVVGLEASVPLDKTDAFNPINRRISIVVLNNRTANAV 277