Pairwise Alignments

Query, 245 a.a., flagellar type III secretion system pore protein FliP from Escherichia coli ECOR27

Subject, 258 a.a., flagellar biosynthetic protein FliP from Pseudomonas stutzeri RCH2

 Score =  271 bits (692), Expect = 1e-77
 Identities = 146/257 (56%), Positives = 183/257 (71%), Gaps = 16/257 (6%)

Query: 1   MRRLLSVAPVLLWLITPLAFAQ--------------LPGITSQPLPGGGQSWSLPVQTLV 46
           M R+L VA  +L L  PLA AQ              +P IT      G Q +S+ +Q L+
Sbjct: 1   MLRILLVA--VLMLCGPLAMAQEPSGILAQGNNPLSIPAITLTTDAEGQQEYSVSLQILL 58

Query: 47  FITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID 106
            +T+L+FIPA +++MTSFTRIIIVF +LR ALG    P NQ+L+GL LFLT FIM+PV D
Sbjct: 59  IMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILIGLTLFLTLFIMAPVFD 118

Query: 107 KIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVP 166
           +I  DA QP+  E+I  QEA+ +   PL+ FML QTRE+DL LF RL+    +  PEA P
Sbjct: 119 RINQDALQPYLSEQIPAQEAISRAEVPLKNFMLAQTRESDLELFVRLSRRTDIASPEAAP 178

Query: 167 MRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLF 226
           M IL+PA+VTSELKTAFQIGF IFIPFLIID+V+ASVLMA+GMMM+ P  I+LPFK+MLF
Sbjct: 179 MTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSPLIISLPFKIMLF 238

Query: 227 VLVDGWQLLVGSLAQSF 243
           VLVDGW L++G+LA SF
Sbjct: 239 VLVDGWGLIIGTLAGSF 255