Pairwise Alignments

Query, 245 a.a., flagellar type III secretion system pore protein FliP from Escherichia coli ECOR27

Subject, 293 a.a., flagellar biosynthesis protein FliP (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  216 bits (550), Expect = 4e-61
 Identities = 124/257 (48%), Positives = 161/257 (62%), Gaps = 19/257 (7%)

Query: 3   RLLSVAPVLLWLITPLAFAQLPG------------ITSQPLPGGGQSW----SLPVQTLV 46
           RLLS+   LL    PL+   L G             T Q   G GQ+     SL ++ L 
Sbjct: 38  RLLSLVTALL---LPLSLLSLLGGGVAHAAQDLVMPTMQLTLGAGQTEPEKVSLLLEILF 94

Query: 47  FITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVID 106
            +T L+  PAI+L +TSFTRIIIVF  +R ALG    PP+QVL  LA+F+T  IM PV  
Sbjct: 95  MLTVLSLAPAIMLTVTSFTRIIIVFHFIRQALGVQQLPPSQVLASLAIFMTVVIMMPVGK 154

Query: 107 KIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVP 166
           +I   A QP+ EE+I   EAL+K   PLR FM + TRE DL +F  +      +  E VP
Sbjct: 155 QINDTALQPYLEERIGFNEALDKAQVPLRSFMFKHTREKDLSIFYAITKMEQPRTKEEVP 214

Query: 167 MRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLF 226
             +L  AYV SELKT F IGF I+IPFL++D+V++S+L+A+GMMM+PP  +++PFKL+LF
Sbjct: 215 TVMLAAAYVISELKTGFTIGFLIYIPFLVLDMVVSSILLAMGMMMLPPMMVSMPFKLLLF 274

Query: 227 VLVDGWQLLVGSLAQSF 243
           V+VDGW LLVGSL  SF
Sbjct: 275 VMVDGWALLVGSLVNSF 291