Pairwise Alignments

Query, 265 a.a., DgsA anti-repressor MtfA from Escherichia coli ECOR27

Subject, 274 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  119 bits (299), Expect = 5e-32
 Identities = 71/234 (30%), Positives = 117/234 (50%), Gaps = 8/234 (3%)

Query: 19  WQEALS--IPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFELDSLRSCRIALLFCLPV 76
           W+  L   +P    L    Q +L    + FL +K  V   G ++       IA   CL +
Sbjct: 41  WRAILKRRLPFFHALPADLQLQLKRHIQVFLAEKHFVGCDGLQITDEIRVTIAAQACLLL 100

Query: 77  LELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQD 136
           L    ++     ++L+YP  F+VD + +D  GL+  QR V +G+SW+ G ++L+W +  +
Sbjct: 101 LNRKTDFYPKLRQILVYPDAFIVDSQRQDPAGLISEQRNVLAGESWEHGQVILSWKNTLE 160

Query: 137 --SFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLR-EVAGWEHDLHAAMNNIQEEIEL 193
             +    G N++IHE AH+LD  +G  A+G P +  R +   W    + A N +  +  +
Sbjct: 161 GAANPHDGNNVVIHEFAHQLDQEDG-YANGAPILQRRQDYRSWSSVFNQAFNELVHDAAM 219

Query: 194 VGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPL 247
                +  D Y A++PAE FAV++E FF  P       P+L++    FYQ DP+
Sbjct: 220 --GKPSLFDYYGATNPAEFFAVVTEVFFEKPAALNLEHPALYRELSHFYQVDPI 271