Pairwise Alignments

Query, 311 a.a., L,D-transpeptidase from Escherichia coli ECOR27

Subject, 304 a.a., ErfK/YbiS/YcfS/YnhG (RefSeq) from Shewanella amazonensis SB2B

 Score =  358 bits (919), Expect = e-104
 Identities = 174/294 (59%), Positives = 221/294 (75%), Gaps = 1/294 (0%)

Query: 11  FALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANP 70
           F+L+    ++LAV YPLP + SRLVG++    VPD + + LE  AAQ+  GLSN++EANP
Sbjct: 11  FSLISFCQSALAVIYPLPAKDSRLVGENQYYVVPD-DKRTLEDIAAQFQLGLSNLMEANP 69

Query: 71  GADVFLPKSGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGR 130
           G D FLPK GS L IP QLILP   R+GIV+N+AEMRLYYYP     VEV PIGIGQ GR
Sbjct: 70  GVDPFLPKPGSTLIIPHQLILPDAPREGIVINIAEMRLYYYPKGKKIVEVLPIGIGQVGR 129

Query: 131 ETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYA 190
           +TP NWVTTV+RK+  PTWTPT   R+EYA +G +LP   PAGPDNPMGL+A+YIG LYA
Sbjct: 130 DTPENWVTTVQRKRANPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLFALYIGNLYA 189

Query: 191 IHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEV 250
           IHGTNA FGIGLRVSQGC+RLR+ DI++LF++VPVGTRVQ ++QP+K T EPDG+ +LEV
Sbjct: 190 IHGTNATFGIGLRVSQGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKATEEPDGARYLEV 249

Query: 251 HEPLSRNRAEYESDRKVPLPVTPSLRAFISGQEVDVNRANAALQRRSGMPVQIS 304
           H+PLSR +AE++S   VPL +  ++  F++  E D       L+ R+GMP +I+
Sbjct: 250 HQPLSRTQAEFDSAEPVPLTLPTAISRFVAHAETDSFVLKRLLEARTGMPTRIN 303