Pairwise Alignments

Query, 311 a.a., L,D-transpeptidase from Escherichia coli ECOR27

Subject, 304 a.a., ErfK/YbiS/YcfS/YnhG family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  360 bits (924), Expect = e-104
 Identities = 179/292 (61%), Positives = 216/292 (73%), Gaps = 1/292 (0%)

Query: 13  LLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGA 72
           L+F S ++LA  YPLP   SRLVG++   TVP+     LE  AA++  GLSN+LEANPG 
Sbjct: 13  LVFPSLSALATEYPLPSSKSRLVGENLYYTVPE-GKHTLEDIAAKFQLGLSNLLEANPGV 71

Query: 73  DVFLPKSGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRET 132
           D FLP  GS+L IPQQLILP   R+GIV+NVAEMRLYYYP   NTVEV PIGIGQ G++T
Sbjct: 72  DPFLPTPGSKLLIPQQLILPNAPREGIVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDT 131

Query: 133 PRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIH 192
           P NWVT+V+RK+  PTWTPTP  R+EYA RGE LPA  PAGPDNPMGLYA+YIG LYAIH
Sbjct: 132 PENWVTSVQRKRANPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIH 191

Query: 193 GTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHE 252
           GTNA+FGIGLRVSQGC+RLR+DDI++LF  VPVGTRVQ ++QP+K T EPDG  +L VH+
Sbjct: 192 GTNASFGIGLRVSQGCVRLRHDDIEHLFKTVPVGTRVQFVNQPIKATEEPDGKRYLAVHQ 251

Query: 253 PLSRNRAEYESDRKVPLPVTPSLRAFISGQEVDVNRANAALQRRSGMPVQIS 304
           PLSR  AE+ES   V L +   +  FI+  + D       L  R+G+P  I+
Sbjct: 252 PLSRTIAEFESAEPVSLTLPKEIAKFIAKADTDSAVIKKLLDERTGVPTIIN 303