Pairwise Alignments

Query, 310 a.a., Inner membrane protein YfdC from Escherichia coli ECOR27

Subject, 280 a.a., formate transporter FocA from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 29/247 (11%)

Query: 48  GEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSF--LLENLGYTFGFIIV 105
           GE + ++ A      AI+AG+ +G + +   +       +P     LL  L ++ G I+V
Sbjct: 22  GEGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMPYGVTKLLGGLAFSLGLILV 81

Query: 106 IMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEYMPIFN 165
           ++   +LFT + +  V     K +      L+R W VV  GN+ G+ I  +       F 
Sbjct: 82  VITGGELFTSSVLILVAKASGKISWKE---LVRNWTVVYFGNLCGSIILVFIMLATRQFM 138

Query: 166 EETRDA---FVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAA--KIVVIILMT 220
           E+        + I    + +T  + FA  ++   L+   VWM  +A +   K++V+IL  
Sbjct: 139 EDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSARSLTDKVMVLILPV 198

Query: 221 WLIALGDTTHIVVGSVEI------------LYLVFNGT-------LHWSDFIWPFALPTL 261
            +       H +    ++             +    G        L++ +FI    +P  
Sbjct: 199 AMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMTGANIAQYADLNFVNFIVNNLIPVT 258

Query: 262 AGNICGG 268
            GNI GG
Sbjct: 259 LGNIVGG 265