Pairwise Alignments

Query, 326 a.a., Uncharacterized protein YggR from Escherichia coli ECOR27

Subject, 345 a.a., twitching motility protein (RefSeq) from Shewanella loihica PV-4

 Score =  286 bits (732), Expect = 5e-82
 Identities = 155/327 (47%), Positives = 210/327 (64%), Gaps = 3/327 (0%)

Query: 1   MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPD---VEELLREWLDDDQR 57
           M + E++A SVKHN SDLHL +      R+ G +      A D   V  L+ + ++D QR
Sbjct: 1   MEITELLAFSVKHNASDLHLSAGVSPMIRVDGEVRKINLPALDHQGVHSLVYDIMNDKQR 60

Query: 58  AILLENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLK 117
               E+ ++DF+  +    R R +AF Q +G +   R +PS    LE+LGAP +  ++  
Sbjct: 61  KDYEEHLEIDFSFEVPNLARFRVNAFNQSRGAAAVFRTIPSEILSLEKLGAPEIFKKIAS 120

Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYIYASQRCLIQQREIGL 177
              GL+LVTG TGSGKSTTLA M+ Y+N++   HILT+EDP+E+++ +++CLI QRE+  
Sbjct: 121 FPRGLVLVTGPTGSGKSTTLAGMIDYVNENRHDHILTIEDPIEFVHQNKQCLINQREVHR 180

Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237
           H  +F + LR+ALREDPDVIL+GE+RD ETIRLA+TAAETGHLV  TLHT  AA+ ++R+
Sbjct: 181 HTHSFNAALRSALREDPDVILVGEMRDLETIRLAMTAAETGHLVFGTLHTTSAAKTIDRV 240

Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297
           VD FP  EK  VR  L+ SL+AV+SQ L      GRVA  E+++ TPA+ NLIRE K  Q
Sbjct: 241 VDVFPEGEKSMVRTMLSESLQAVISQTLIKKVGGGRVAAHEIMMGTPAIRNLIREDKVAQ 300

Query: 298 LPHVIQTGQQVGMLTFQQSYQQRVGEG 324
           +   IQTG   GM T  Q  Q  V  G
Sbjct: 301 MYSAIQTGMAHGMQTLDQCLQNLVNRG 327