Pairwise Alignments

Query, 414 a.a., serine/threonine transporter SstT from Escherichia coli ECOR27

Subject, 439 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  144 bits (362), Expect = 7e-39
 Identities = 114/410 (27%), Positives = 203/410 (49%), Gaps = 33/410 (8%)

Query: 18  LVKQILVGLVLGILLAWISK---PAAEAV------GLL---GTLFVGALKA-VAPILVLM 64
           L  +IL+G+  GIL   + +   P +E +      GLL   G++F+ +L+  V P++ + 
Sbjct: 11  LTGKILIGMAGGILTGLLLRSFFPGSEFIEEYITNGLLNVVGSIFISSLQMLVVPLVFIS 70

Query: 65  LVMA--SIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSS--AGDIS 120
           LV    S+++     +   + I F       + ++A +V     P    L++      + 
Sbjct: 71  LVCGTCSLSDPSSLGRLGGKTIAFYLFTTAIALSMAILVALLVHPGNASLAAENMQYSVK 130

Query: 121 PPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKN---LVNDM 177
               + +V+  LV     NPI A+ +GN + I+++A+  GFA+ H  E  K    L ND+
Sbjct: 131 EAPSLSDVLINLVPR---NPIQAMTEGNMLQIIIFAVIFGFAISHIGERGKRVSALFNDL 187

Query: 178 SNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALVVNPLL 237
           +  +  +V L+++ AP GIF L+     T G  T     +  +V++  +L+ A V  P+L
Sbjct: 188 NEVIMRVVTLIMQLAPYGIFALMGKLALTLGLETFESVVKYFMVVLAVLLVHAFVSYPVL 247

Query: 238 VWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCE-KLNLDRDTYSVSIPLGA 296
           +      +PF  +   +R+  ++AF T SS A +PV +   E +L +D    S ++PLGA
Sbjct: 248 LKLFSGLSPFTFIRK-MRDVQLFAFSTASSNATLPVTLETSEHRLGVDNKVASFTLPLGA 306

Query: 297 TINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLAC 356
           TINM G AI   V T+      GI + +    ++ V A+L + G +GV G  L+++ +  
Sbjct: 307 TINMDGTAIMQGVATVFIAQVFGIDLTITDYAMVVVTATLASIGTAGVPGVGLIMLAM-- 364

Query: 357 NMFGISNDIAMQVVAVGFIIGV--LQDSCETALNSSTDVLFTAAACQAED 404
               + N + + V  +  I+GV  L D   TA+N + D + T    ++E+
Sbjct: 365 ----VLNQVGLPVEGIALIMGVDRLLDMVRTAVNVTGDSVATVIIAKSEN 410