Pairwise Alignments

Query, 711 a.a., polyribonucleotide nucleotidyltransferase from Escherichia coli ECOR27

Subject, 699 a.a., polynucleotide phosphorylase/polyadenylase (RefSeq) from Shewanella amazonensis SB2B

 Score = 1017 bits (2629), Expect = 0.0
 Identities = 516/699 (73%), Positives = 599/699 (85%), Gaps = 1/699 (0%)

Query: 2   LNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTV 61
           +NPIV+ F+YGQHTVTLETG++ARQA  AVM SM DT V VTVVG+K+A PG+DFFPLTV
Sbjct: 1   MNPIVKSFEYGQHTVTLETGVIARQADGAVMASMGDTTVLVTVVGKKEADPGRDFFPLTV 60

Query: 62  NYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVN 121
           NYQE+TYAAG+IPG FF+REGRPSE ETLIARLIDRPIRPLFP+ F NEVQVI TVVSV+
Sbjct: 61  NYQEKTYAAGKIPGGFFKREGRPSEDETLIARLIDRPIRPLFPDDFTNEVQVIITVVSVD 120

Query: 122 PQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAG 181
           PQ+ PDIV+MIG SAAL++SGIPFNGP+GAARVGY+N +YVLNP   EL  S+LDLVVAG
Sbjct: 121 PQIEPDIVSMIGTSAALAISGIPFNGPLGAARVGYVNGEYVLNPGAAELAGSELDLVVAG 180

Query: 182 TEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNEA 241
           T++AVLMVESEA+ L E+ MLGAVV+GH+QQQVVI  INE   EAGKPRW+W     NEA
Sbjct: 181 TQSAVLMVESEAKSLPEEVMLGAVVYGHDQQQVVINAINEFAAEAGKPRWNWTAPVKNEA 240

Query: 242 LNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAIE 301
           L A++  LAE  L+ AY+I  KQERY  V  +K  TIA L   +  ++  E  ++L ++E
Sbjct: 241 LVAQIKELAEEGLTAAYQIMAKQERYEAVGEVKKATIAKLQEANPDVNVREAADLLGSLE 300

Query: 302 KNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARD 361
           KNVVR R++AG PRIDGRE DMIR L V  GVLPRTHGSALFTRGETQALVT TLGT RD
Sbjct: 301 KNVVRGRIIAGMPRIDGREPDMIRALSVMAGVLPRTHGSALFTRGETQALVTCTLGTERD 360

Query: 362 AQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKF 421
           AQ +D +MGERT+ F+ HYNFPPYSVGETGMVGSPKRREIGHG+LA RG+ AVMP  ++F
Sbjct: 361 AQKIDSIMGERTNRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGINAVMPSAEEF 420

Query: 422 PYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDI 481
           PY+VRVVSEITESNGSSSMASVCG SLALMDAGVPIK +VAGIAMGLVKEGDN+VVLSDI
Sbjct: 421 PYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDNFVVLSDI 480

Query: 482 LGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAI 541
           LGDEDHLGDMDFKVAG+RDG++ALQMDIKIEGITKEIM++AL QA GAR+HIL VM+QAI
Sbjct: 481 LGDEDHLGDMDFKVAGTRDGVTALQMDIKIEGITKEIMEIALQQAYGARVHILNVMDQAI 540

Query: 542 NAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATD 601
            + R DIS+FAPRI TIKINP+KI+DVIGKGG+VIRALTEETGTTIE+EDDGTVKIA+ +
Sbjct: 541 GSARPDISDFAPRITTIKINPEKIRDVIGKGGAVIRALTEETGTTIELEDDGTVKIASNN 600

Query: 602 GEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEK 661
           G+  + AIRRIEEIT+E+EVGR+YTGKV RIVDFGAFV I  GK+GLVHISQI+D+RV  
Sbjct: 601 GDATREAIRRIEEITSEVEVGRLYTGKVIRIVDFGAFVNILPGKDGLVHISQISDERVAN 660

Query: 662 VTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAA 700
           V+D+LQ+ QEV VKV+EVDRQGR+RLSIKEA +  +PAA
Sbjct: 661 VSDHLQLNQEVTVKVMEVDRQGRVRLSIKEA-QVKEPAA 698