Pairwise Alignments

Query, 1034 a.a., multidrug efflux RND transporter permease subunit AcrF from Escherichia coli ECOR27

Subject, 1070 a.a., multidrug resistance protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 1332 bits (3447), Expect = 0.0
 Identities = 663/1030 (64%), Positives = 831/1030 (80%), Gaps = 2/1030 (0%)

Query: 1    MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT 60
            MA FFI RP+FAWV+AII+M+AGAL+IL LPV+QYP IAP +V++SA+YPGA A+TV+DT
Sbjct: 1    MARFFIDRPVFAWVIAIIIMLAGALSILSLPVSQYPKIAPTSVNISASYPGASAKTVEDT 60

Query: 61   VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ 120
            VTQVIEQ M GID+L YMSSTSD+ G V+ITLTF + TDPDIAQVQVQNKL LATP+LP+
Sbjct: 61   VTQVIEQKMKGIDSLRYMSSTSDATGQVSITLTFDASTDPDIAQVQVQNKLALATPMLPE 120

Query: 121  EVQQQGISVEKSSSSYLMVAGFVSDNPDTTQDDISDYVASNVKDTLSRLNGVGDVQLFGA 180
             VQ+QGI+V KS+SS+LM+    SD+P  T  D+SDY A+ + D +SR++GVG+ QLFGA
Sbjct: 121  AVQRQGITVNKSTSSFLMIIALASDDPSLTGRDLSDYAATYLLDPISRVDGVGETQLFGA 180

Query: 181  QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL 240
            QYAMR+WLD   L  Y++TP DV + +  QN QI+ GQ+GGTPA+PGQ ++ +I++Q+ L
Sbjct: 181  QYAMRVWLDPHKLMNYRMTPADVRSAITAQNTQISVGQIGGTPAVPGQGMSFTILSQSLL 240

Query: 241  KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL 300
            +  E+F ++ LRV  DGS VRL DVARVELG ENY+ ++  NGKP+ G+ IKLATGANAL
Sbjct: 241  QTREQFERIVLRVEQDGSTVRLADVARVELGSENYDAVSHFNGKPSTGIAIKLATGANAL 300

Query: 301  DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ 360
            DT K ++  +  L    P+G++ ++PYDTTPFV++SI EVVKTL EAI+LVFLVMYLFLQ
Sbjct: 301  DTVKRVRTTMEGLAKNLPEGIRCVFPYDTTPFVRVSIEEVVKTLAEAIVLVFLVMYLFLQ 360

Query: 361  NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420
            N+RAT+IPTIAVPVVLLGTF  LAAFG+SIN LTMFG+VLAIGLLVDDAIVVVENVER+M
Sbjct: 361  NIRATIIPTIAVPVVLLGTFGALAAFGFSINMLTMFGVVLAIGLLVDDAIVVVENVERIM 420

Query: 421  MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL 480
             E+ LPP+EAT KSM +I GALVGIA+VLSAVFIPMAF  GS+G IYRQFS+TIVSAM L
Sbjct: 421  TEEGLPPREATRKSMGEITGALVGIALVLSAVFIPMAFIKGSSGVIYRQFSLTIVSAMTL 480

Query: 481  SVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY 540
            SV+VAL+LTPALCAT LKP+    H+ +GGFFGWFN  FD +   Y   V  + G  GR 
Sbjct: 481  SVVVALVLTPALCATFLKPLHKHEHQAQGGFFGWFNRMFDRTSRGYRKQVTGVTGRVGRT 540

Query: 541  LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN 600
            + IYAL++AG   LF+RLP+SFLPEEDQGV  +++QLP G+ QE+T +VL ++  +YL +
Sbjct: 541  MCIYALLLAGTAFLFMRLPTSFLPEEDQGVIFSLVQLPTGSPQEKTLEVLKKLEHHYLVD 600

Query: 601  EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDG 660
            EK  V S+FTV GFSF+G+ QNAG+AFV LKPW+ER G+  SA AV  RA     +IR+ 
Sbjct: 601  EKETVNSLFTVAGFSFAGRGQNAGLAFVQLKPWDERKGEGMSAAAVAGRAMRAFSRIRNS 660

Query: 661  FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL 720
             V  F  PA+ ELG A+GF+  L D+ G+GH+AL QARNQLLGMAAQ+PA  V +RPNG+
Sbjct: 661  VVYAFTPPAVQELGNASGFNLFLQDREGVGHEALMQARNQLLGMAAQNPAIAV-LRPNGM 719

Query: 721  EDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRM 780
            EDT QF+++VD  KA A G++++D+N  +STALGG YVNDFIDRGRVKKVY+Q DA FRM
Sbjct: 720  EDTPQFRIDVDAAKAGAHGLTMADVNGVLSTALGGAYVNDFIDRGRVKKVYLQGDAPFRM 779

Query: 781  LPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAM 840
            +PED++  +VR+A G MVPFSAF+T+ W YGSPRLERYNGLP++E+ G AAPG S+G+AM
Sbjct: 780  MPEDINAWHVRNAQGNMVPFSAFSTASWTYGSPRLERYNGLPAVELVGSAAPGKSTGEAM 839

Query: 841  ALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSV 900
              +E++A+KLP G+G  WTG+SYQER+SG+QAPAL AIS +VVFLCLAALYESWS+P +V
Sbjct: 840  QAVEDMAAKLPPGVGISWTGLSYQERMSGSQAPALYAISILVVFLCLAALYESWSVPTAV 899

Query: 901  MLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVV 960
            +LVVPLGI+G L+A       NDV+F VGLLTTIGL+AKNAILIVEFA  L+ K G+ ++
Sbjct: 900  ILVVPLGIIGALMATLGRGLNNDVFFQVGLLTTIGLAAKNAILIVEFAMHLV-KSGRPLL 958

Query: 961  EATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFF 1020
            +AT  A R+RLRPILMTSLAF+LGVLP+AIS GAGSG+Q A+G GVMGGM SAT+LA++F
Sbjct: 959  DATAEAARLRLRPILMTSLAFLLGVLPMAISTGAGSGSQRAIGTGVMGGMFSATVLAVYF 1018

Query: 1021 VPVFFVVIRR 1030
            VPVFFV++ R
Sbjct: 1019 VPVFFVMVYR 1028