Pairwise Alignments

Query, 367 a.a., branched chain amino acid ABC transporter substrate-binding protein LivJ from Escherichia coli ECOR27

Subject, 370 a.a., Extracellular ligand-binding receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  274 bits (700), Expect = 3e-78
 Identities = 147/348 (42%), Positives = 201/348 (57%), Gaps = 2/348 (0%)

Query: 14  ALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYD 73
           ALA S +    DI V +   ++G +A  G+Q   GAE A+A  N  GG+KG  + +   D
Sbjct: 15  ALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKAGGLKGETITLQVED 74

Query: 74  DACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARG 133
           DACDPKQ VAVANK V+ G++ VIGH+C+  T  AS +Y +E I M+T +AT P+LT RG
Sbjct: 75  DACDPKQGVAVANKFVSAGVEAVIGHMCTGPTMAASTVYSEEEIPMVTASATGPDLTERG 134

Query: 134 YQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKGNANVV 193
              + R TG D  QG  A K I E+   Q  AIVHDKQ YG GLA   +  +        
Sbjct: 135 LTNVFRATGRDDQQGTIAGKMIAERFADQTTAIVHDKQAYGRGLAEEAKKAMNAAGKEEA 194

Query: 194 FFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVAN 253
            F  I  GE+DFS L++RLK+  +  VYYGGY+ ++GQI+RQ+RA GL   F+G +G+++
Sbjct: 195 LFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQGLDAVFVGGDGLSS 254

Query: 254 VSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAG 313
                I GE+ EG L T   +    PA K  V+A KA  +  +  F +  YAA Q L   
Sbjct: 255 SEFWAITGEAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNFAYYYYAAAQVLTQA 314

Query: 314 LNQ--SDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHA 359
           + +  S DP  + K L+ N+ +TV GP+ +D KGDL    F  + W A
Sbjct: 315 MAKAGSADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQWSA 362